PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911868.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YA
Protein Properties Length: 293aa    MW: 31779.4 Da    PI: 9.3818
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911868.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.49e-32141195358
       CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     p+YVN+KQy++Il+RRq+Rakle+++kl  k+rkpylheSRh+hAl+R Rg+gGrF
  XP_023911868.1 141 PIYVNPKQYHGILRRRQSRAKLEAQNKL-VKARKPYLHESRHRHALNRTRGTGGRF 195
                     9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MPHLTVKCSS WWNSNEQKIP SSSSKTASLK MDSPPQQIHE AKHLGLQLPD QESSTIQFTG  60
QSHHEVGAVG GTNSQGQCIS SESDQDEGCG NAKGQMKARV PYPYAEPCVG GLLTAYGPQA  120
IMMGMAPARV PLPLDFTDYG PIYVNPKQYH GILRRRQSRA KLEAQNKLVK ARKPYLHESR  180
HRHALNRTRG TGGRFLSTKK GQNPDPTATS SNHYVSDTEN ISDFDSSQFG TRQHVGSITA  240
CSDITSVSNR NGNNAYQQPG HRFSGLSPHL GGAMQCNGSL VPGGTQHCAS VVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-51NF-YA family protein