PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910531.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ZF-HD
Protein Properties Length: 339aa    MW: 37035.6 Da    PI: 8.4298
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer110.49.5e-3568124358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                      v+Y+eClkNhAaslGgha+DGCgEfmps++++ +++++lkCaACgCHRnFHRre++
  XP_023910531.1  68 VVTYRECLKNHAASLGGHALDGCGEFMPSQSATpADPTSLKCAACGCHRNFHRREPD 124
                     589**************************99999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MDLTPTITTT NKNTTINNTT AKSPEADSET PTRIQPSKPL SFSNGVLKRH NPHHHHHHQH  60
HFTSPQLVVT YRECLKNHAA SLGGHALDGC GEFMPSQSAT PADPTSLKCA ACGCHRNFHR  120
REPDDPIPTS QTTHVIEYHP HHRHHPPPPP QPPQSQPQLP SNRSPNSASP PPISSSYFPS  180
SAPHMLLALS GGLSAPPDTP TGHNNAILTP SPNGRKRFRT KFSQDQKEKM HQFAERVGWK  240
MQKRDEELVL EFCNEVGVDK GVLKVWMHNN KNTFGKRDVN GGGAGNSNNI LEHTHNGNGI  300
NNNENNNSNN NSNLGENLNH YQSDSGAHGG ATNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.15e-80ZF-HD family protein