PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910067.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 331aa    MW: 36603.5 Da    PI: 4.6698
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-102552951055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_023910067.1 255 RKRREKINERLRVLQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 295
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MEHLGAISEG QWSSLSGMYT PEEAHFIAQV LNNLPSAFWP CHDSSMNMAG LTEFSYYYSD  60
MANSISSNFG GGILSQKGYY MSDSHPILAS KNSSMSIDIC MADMKNSSSF LIEGNDCLNQ  120
EMSDEIPEES AGYLEGDLRX SMPDSISEDK CNNPSENSKK RARSLEDARK SIQIQQSKKN  180
RKLAMIDNNE EDGNPGLTGQ SSSSCSSEDE SNSSQELNVG VTSSLTTKGD VTLNLNGKTI  240
AWRGSATDPQ SVYARKRREK INERLRVLQN LVPNGTKVDI STMLEEAVQY VKFLQHQIKL  300
LSSDELWMYA PIAYNGLDIG LDLKNTSLRK S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1255260RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-54bHLH family protein