PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023909149.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 585aa MW: 63973.1 Da PI: 8.7683

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023909149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	55.2	1.2e-17	282	331	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq XP_023909149.1 282 RSKHSATEQRRRSKINDRFQMLRELIPNS----DQKRDKASFLLEVIEYIQFLQ 331 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MELPQPRPFG TEGRKPTHDF LSLYTHSTAQ QDPRPSSQGS YLKTHDFLQP LERIGKTSAK 60 EETTAEISSV EKPPPQAPPP SVEHTLPGGI GTYTISHISS YFNQRVPKPE GSIYTVAQTS 120 STDRNDENSN SSSYTGSGFT LWEESALKKG KTGKENMGEK PVTREAGAKL SGQQWTTSSE 180 RPSLSSNSNN NNNNHRNSFS SLSSPQATGQ KNKNKSFMEM IKSAQGSTHE DDIIIDDEEE 240 FVLKKEPSTP VATTATLTPP HIGELRVKVD GKSSDQKANT PRSKHSATEQ RRRSKINDRF 300 QMLRELIPNS DQKRDKASFL LEVIEYIQFL QEKVHKYEGS YQGWSHEPAK LMPWRNNHRP 360 AESYVDQSRC VNGASAPALV FAGKFDEKNI CVSPTIAGSA QKPVESDIST ATTFKQMDNH 420 PIITNKGIPL PMSLQPNVFT PVRISGAVPQ LPPKLASDAE NISSHSQPQL CQLRSCPTDG 480 GTTSDKPKEQ DLTVEGGTIS ISSVYSQGLL NSLTEALQSS GVDMSQASIS VQIELGKQSN 540 GRATRPPSVV KVNEVPTSNQ GTIRSRVASA EDSDQARKKL KTGKS

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MELPQPRPFG TEGRKPTHDF LSLYTHSTAQ QDPRPSSQGS YLKTHDFLQP LERIGKTSAK  60
EETTAEISSV EKPPPQAPPP SVEHTLPGGI GTYTISHISS YFNQRVPKPE GSIYTVAQTS  120
STDRNDENSN SSSYTGSGFT LWEESALKKG KTGKENMGEK PVTREAGAKL SGQQWTTSSE  180
RPSLSSNSNN NNNNHRNSFS SLSSPQATGQ KNKNKSFMEM IKSAQGSTHE DDIIIDDEEE  240
FVLKKEPSTP VATTATLTPP HIGELRVKVD GKSSDQKANT PRSKHSATEQ RRRSKINDRF  300
QMLRELIPNS DQKRDKASFL LEVIEYIQFL QEKVHKYEGS YQGWSHEPAK LMPWRNNHRP  360
AESYVDQSRC VNGASAPALV FAGKFDEKNI CVSPTIAGSA QKPVESDIST ATTFKQMDNH  420
PIITNKGIPL PMSLQPNVFT PVRISGAVPQ LPPKLASDAE NISSHSQPQL CQLRSCPTDG  480
GTTSDKPKEQ DLTVEGGTIS ISSVYSQGLL NSLTEALQSS GVDMSQASIS VQIELGKQSN  540
GRATRPPSVV KVNEVPTSNQ GTIRSRVASA EDSDQARKKL KTGKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-123	bHLH family protein