PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908969.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family TCP
Protein Properties Length: 353aa    MW: 37666 Da    PI: 8.6985
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP115.56.7e-3679150273
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 
                      +k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++
  XP_023908969.1  79 VAKRGSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAM 150
                     578999**********************************************************88888444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MAMFQKQELE EEYRGATRAV DLRINEISGA QEARPTMPPK PKEEPDSEEE EEDDDTSRAM  60
QVMPVAMHVP SGIPMTKAVA KRGSTKDRHT KVEGRGRRIR MPATCAARIF QLTRELGHKS  120
DGETIRWLLE HAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TPAPTSDPKP GDPPVKKKRK  180
RPANSEYIDI NDGVSVSSGL APISTATATI PMPQIQAVPQ ALVPMWAIPS NAVVPGAFIM  240
VPPMTSIPGA PNPAHIFTFP ATATPLINIS ARPISSFVSS MANNIAQPVQ IQASSAASCS  300
SSATAITTST TTIGTVSAPT ATISSSTTQK LRDFSLEIYD KQELQFMSRS SKN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175182VKKKRKRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.11e-72TCP family protein