PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023908135.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 289aa MW: 32629.5 Da PI: 8.6749

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023908135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00072	7	27	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k+F + + H+r+H XP_023908135.1 7 CKICNKRFANGKAMGGHMRSH 27 *******************99 PP
2	zf-C2H2	12.2	0.00057	175	197	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C k+F++ L H +H XP_023908135.1 175 FRCETCRKVFPSYQALGGHRASH 197 89***********9999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MEKHRICKIC NKRFANGKAM GGHMRSHLAK LPLPPKHENS AQTESAQTLS PSSSTSLNFH 60 HRNNMMQSYR SINGGELSTE EATFHGESDT DSRPKNASRR RSKRPRKIET EPVKFSAEEV 120 AMWLLKLSKD KWTKGKQKVR QKVETDKEED DAEEEEKEDY SVSKICKKSH SQTKFRCETC 180 RKVFPSYQAL GGHRASHKKI RNNDEDDLED DNDNFVVDEK VFECPFCFKV FDSGQALGGH 240 KKVHLSNLGN GNANARSSAR NKLIDLNLPA PVDEDEVISI VSNAASVVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	9e-32	C2H2 family protein