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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023907751.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WRKY | ||||||||
Protein Properties | Length: 465aa MW: 50484.8 Da PI: 5.1851 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.7 | 7.7e-31 | 240 | 298 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_023907751.1 240 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 298 699************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 465 aa Download sequence |
MSISLFMSRM DNYQGDLTDI VRASGGPYGC ITGNSSQPIS EWQFPSDPMI FSSIQEQPRD 60 NFGDPFSNMR DPLLNELHLS SSSSFFGSSN SADVIGTATS SVEESHTSGF TGLLHVDVGG 120 GVGSSSSSTS VNVLDHDEMK RPCNIFSRML QISPNNAKLS VSPCGSPVMA RGIKAPAMLP 180 SDILSVPNSS KPCFIDNTAV QISSPRNPGI KRRKSQAKKV VCIPAPAAAN SRPSGEVVPS 240 DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS RTDPNMLVIT YTSEHNHPWP 300 TQRNALAGST RSQPSKTNVT SKNSLGAQLA QKPTSPKEEQ RESSNDNNVS SVIAGSSATS 360 ASVKEEIEDI DKQLEMDNDG EFSNDQGFDY RPAMIVGSNQ SDQDFFAELE EIETDPLDLL 420 FNQGFTGDHE QKESKAMDPF SLFDWPSGDN NTNTTNSFGE AKRGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 2e-96 | WRKY family protein |