PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023906743.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 427aa MW: 47997.6 Da PI: 7.1378

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023906743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.7e-32	253	307	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHe+Fve+v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+ XP_023906743.1 253 KTRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMDTDGLTIFHVKSHLQKYRI 307 68****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	257	306	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e++v++v++lGg t+k+I + m g+t ++ks++qky+ XP_023906743.1 257 RWTQDLHEKFVECVNRLGGAekaTPKAILKLMDtDGLTIFHVKSHLQKYR 306 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MNTHKIDCRE QVNESNGVIN DCSSEFGNRS SEFLGYKQPW HMGTCFQPLN MEGGSQAQYI 60 GPAKSSTTIM SRFESPASAF YATERCMGFP QYEGEVGNPF MSSQFSRSYD SQLPAYQSVG 120 EDYSIDTAHP AEPNFNLRNT LQAIVKSQFS SNQYCGPSEN SYKMSCSNSP ACKLLPHEQN 180 KLLGDDTNYG RRHLLIPFKG NQEIQDHMAN CNSYNSPFGR LNLSSQQEKH SSRESVSVTS 240 GNSASTGAVL SSKTRIRWTQ DLHEKFVECV NRLGGAEKAT PKAILKLMDT DGLTIFHVKS 300 HLQKYRIAIY MPDSTEGKTE KRNILNDLPL FDAKTGLQIR EALQLQLEVQ RRLHEQLEIQ 360 RNLQLKIEEQ GKQLKMMFDQ QQKTNCSILK NHNLDTTFSA DPSISLNDIQ ASIAESSGNS 420 HFPSKIN

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MNTHKIDCRE QVNESNGVIN DCSSEFGNRS SEFLGYKQPW HMGTCFQPLN MEGGSQAQYI  60
GPAKSSTTIM SRFESPASAF YATERCMGFP QYEGEVGNPF MSSQFSRSYD SQLPAYQSVG  120
EDYSIDTAHP AEPNFNLRNT LQAIVKSQFS SNQYCGPSEN SYKMSCSNSP ACKLLPHEQN  180
KLLGDDTNYG RRHLLIPFKG NQEIQDHMAN CNSYNSPFGR LNLSSQQEKH SSRESVSVTS  240
GNSASTGAVL SSKTRIRWTQ DLHEKFVECV NRLGGAEKAT PKAILKLMDT DGLTIFHVKS  300
HLQKYRIAIY MPDSTEGKTE KRNILNDLPL FDAKTGLQIR EALQLQLEVQ RRLHEQLEIQ  360
RNLQLKIEEQ GKQLKMMFDQ QQKTNCSILK NHNLDTTFSA DPSISLNDIQ ASIAESSGNS  420
HFPSKIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	8e-75	G2-like family protein