PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023906693.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 561aa MW: 64271 Da PI: 9.5214

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023906693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.2	6e-09	3	35	58	90
FAR1 58 trtgCkaklkvkkekdgkwevtkleleHnHela 90 r+gC+a+++++++k+gk+++ +e +HnHe++ XP_023906693.1 3 LRCGCEAQMVISRQKSGKYRIPLFEAKHNHEVV 35 69****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MELRCGCEAQ MVISRQKSGK YRIPLFEAKH NHEVVTPRSK HKLPSQRKIS AAQAAEAKLA 60 NRSGIRQKLV FEFMSKQAEG RENLGFTLKD ISNHLQSKRM REMKEGEAVT LIHYFKMRNS 120 ENASFFYEIQ LDVDDQITNI FWADPKMVAD YNLFGDVVCF DTTYRTNKNH HPLAPIIGVN 180 HHRQIVVFGA TFLYDETTET FSWLFRTLLK ATCGKKPVTI FTDQDPAMAK AIAEVLPESH 240 HHLCRWHIYQ SALKKLNRLL EDLRHNELDS NYNMSQRLPV LRVEVLLLKN SRDVYTPKIF 300 NFFQEEYKKS LDMVVNKCYD ISPLFEYKVC MYGHTREHKV IFNSTDQTVV CSCKKFEFAR 360 FLCSHALKVL DIQNIKLLPS RYILKQWTKQ ARVGCVLDSY GCIVKEDPKL DITNRYKDLC 420 RNAVNIASKA AETEEASMFL AKKMVELNLD VERIVKKKSD LPSNEIGMDP SHNEHVDVAS 480 VITAHKATGI KKKIGTSHVK GRPKSFIEKG SRKRRRPCGE TPMTSNTVNI PASLSVDYTQ 540 VTQASSIGFD YSARDGGTGS H

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MELRCGCEAQ MVISRQKSGK YRIPLFEAKH NHEVVTPRSK HKLPSQRKIS AAQAAEAKLA  60
NRSGIRQKLV FEFMSKQAEG RENLGFTLKD ISNHLQSKRM REMKEGEAVT LIHYFKMRNS  120
ENASFFYEIQ LDVDDQITNI FWADPKMVAD YNLFGDVVCF DTTYRTNKNH HPLAPIIGVN  180
HHRQIVVFGA TFLYDETTET FSWLFRTLLK ATCGKKPVTI FTDQDPAMAK AIAEVLPESH  240
HHLCRWHIYQ SALKKLNRLL EDLRHNELDS NYNMSQRLPV LRVEVLLLKN SRDVYTPKIF  300
NFFQEEYKKS LDMVVNKCYD ISPLFEYKVC MYGHTREHKV IFNSTDQTVV CSCKKFEFAR  360
FLCSHALKVL DIQNIKLLPS RYILKQWTKQ ARVGCVLDSY GCIVKEDPKL DITNRYKDLC  420
RNAVNIASKA AETEEASMFL AKKMVELNLD VERIVKKKSD LPSNEIGMDP SHNEHVDVAS  480
VITAHKATGI KKKIGTSHVK GRPKSFIEKG SRKRRRPCGE TPMTSNTVNI PASLSVDYTQ  540
VTQASSIGFD YSARDGGTGS H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	512	516	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-62	FAR1 family protein