PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023906508.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 606aa MW: 66094.4 Da PI: 8.9122

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023906508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	123	1.5e-38	111	214	1	103
HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX..XXXXXXXX CS HSF_DNA-bind 1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks..Fkkgkkel 93 aF++kly++led+++++lisws++++sfv+++++ef+k vL++yFkh+n++SFvRQLnmYgF+kv+d ++ + ++++weFkh Fk+g+ XP_023906508.1 111 AFIHKLYNMLEDPSIQHLISWSSTNESFVMSPSSEFSK-VLAQYFKHTNISSFVRQLNMYGFHKVSDVFHTGSPDSPLWEFKHGAgnFKRGDLVG 204 6***********************************.**************************999999****9888**** PP XXXXXXXXXX CS HSF_DNA-bind 94 lekikrkkse 103 l++ikr++s+ XP_023906508.1 205 LREIKRRASR 214 *****875 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MATLAESPRR SPFPVDPRGY STGTPKALPI LSTSITLPSI NAIDQMDLSQ PHSGAMGPPS 60 QQSPRVNGDR AQEQLAPAPN EHHPASGSNA HPAAAAAAAA AAQQPKVVQT AFIHKLYNML 120 EDPSIQHLIS WSSTNESFVM SPSSEFSKVL AQYFKHTNIS SFVRQLNMYG FHKVSDVFHT 180 GSPDSPLWEF KHGAGNFKRG DLVGLREIKR RASRHALIHR DSFSSATSKA PLPPPPGPPM 240 ESMPDPLENR LGLLEWNSQD LHSRLARTEE AYTAMANKCQ ALLDGISRCH MWNEQLSSHL 300 LTLVPDPENP LHRDVYAMRQ EISSRMENLQ SLGEPPHDAA FGSKHSYFQS NGNFLPDSTL 360 PMSPRQRPFD DSRRPSLQGI HSGGRPNVIR AAVPQHLQTS PRRYGSIGGP ATYSPTVSPQ 420 PPPPPPPSQQ PHPLSNTSPS PGPVRRHTSA DIRVPGWQGG QPSNHYPQGS SPYASGESST 480 AWPSSPRTHM NAGDQQIQET LAQYELPRMT HNSSHRPSSP GPHETGIPSF ANNFGSGSGY 540 VNTNDAGWQL PGPRFPFKGL ETPGPPTRRS SMASNVHSLL NPADTAERDN EDDGTAPDDR 600 KRKRIQ

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MATLAESPRR SPFPVDPRGY STGTPKALPI LSTSITLPSI NAIDQMDLSQ PHSGAMGPPS  60
QQSPRVNGDR AQEQLAPAPN EHHPASGSNA HPAAAAAAAA AAQQPKVVQT AFIHKLYNML  120
EDPSIQHLIS WSSTNESFVM SPSSEFSKVL AQYFKHTNIS SFVRQLNMYG FHKVSDVFHT  180
GSPDSPLWEF KHGAGNFKRG DLVGLREIKR RASRHALIHR DSFSSATSKA PLPPPPGPPM  240
ESMPDPLENR LGLLEWNSQD LHSRLARTEE AYTAMANKCQ ALLDGISRCH MWNEQLSSHL  300
LTLVPDPENP LHRDVYAMRQ EISSRMENLQ SLGEPPHDAA FGSKHSYFQS NGNFLPDSTL  360
PMSPRQRPFD DSRRPSLQGI HSGGRPNVIR AAVPQHLQTS PRRYGSIGGP ATYSPTVSPQ  420
PPPPPPPSQQ PHPLSNTSPS PGPVRRHTSA DIRVPGWQGG QPSNHYPQGS SPYASGESST  480
AWPSSPRTHM NAGDQQIQET LAQYELPRMT HNSSHRPSSP GPHETGIPSF ANNFGSGSGY  540
VNTNDAGWQL PGPRFPFKGL ETPGPPTRRS SMASNVHSLL NPADTAERDN EDDGTAPDDR  600
KRKRIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11660.1	2e-20	HSF family protein