PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023905904.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 369aa MW: 40731.6 Da PI: 8.2692

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023905904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	91.1	2.3e-28	49	135	3	66
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................s 66 g+kdrhsk++T +g+RdRR+Rls+++a +++dLqd+LG+ ++sk i+WLl + k i++l+ + s XP_023905904.1 49 GGKDRHSKVCTVRGLRDRRIRLSVPTAVQLYDLQDRLGLGQPSKVIDWLLDATKLDIDKLPPLpipqgftqfhpqlfshepnasqpS 135 79*************************************************************666555544444443333322221 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MISNSREKDI QAKQEGEANA EKLSKAASSS RQWSGFRNPR IVRVSRSFGG KDRHSKVCTV 60 RGLRDRRIRL SVPTAVQLYD LQDRLGLGQP SKVIDWLLDA TKLDIDKLPP LPIPQGFTQF 120 HPQLFSHEPN ASQPSFIPSF DANPTFINDG ADQNAMEKSK YWDIDAAFRL KSKEVETGSA 180 ANKGKWIKTN EEVIQEGIGG YSGQISAQKF FPMATDSSSN SLPGLLNNAM AYNSHHHSEP 240 SSLSLSQFGS HGLFPSQMNP HTSNAIQLPP SLPLLPASQF FFCPSTTTPA LFTPYSSYIT 300 TPIESDPRQF NHIQFLSSSS QHVLPHPLMP PSLHSMSLPL KSFPTNENSK LPQSQEDNGS 360 RVDNDNAGS

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MISNSREKDI QAKQEGEANA EKLSKAASSS RQWSGFRNPR IVRVSRSFGG KDRHSKVCTV  60
RGLRDRRIRL SVPTAVQLYD LQDRLGLGQP SKVIDWLLDA TKLDIDKLPP LPIPQGFTQF  120
HPQLFSHEPN ASQPSFIPSF DANPTFINDG ADQNAMEKSK YWDIDAAFRL KSKEVETGSA  180
ANKGKWIKTN EEVIQEGIGG YSGQISAQKF FPMATDSSSN SLPGLLNNAM AYNSHHHSEP  240
SSLSLSQFGS HGLFPSQMNP HTSNAIQLPP SLPLLPASQF FFCPSTTTPA LFTPYSSYIT  300
TPIESDPRQF NHIQFLSSSS QHVLPHPLMP PSLHSMSLPL KSFPTNENSK LPQSQEDNGS  360
RVDNDNAGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	3e-45	TCP family protein