PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023905849.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 269aa MW: 28892.3 Da PI: 7.8449

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023905849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.8	9.1e-39	27	112	2	86
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ a+ss+s+++ns XP_023905849.1 27 APKRSSTKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALaAAGSSVSEQGNSV 112 789******************************************************************99965555555555333 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MAENKPAEIT DFQIMIANKD DNKKQLAPKR SSTKDRHKKV DGRGRRIRMP ALCAARVFQL 60 TRELGHKSDG ETIQWLLQQA EPSIIAATGS GTIPASALAA AGSSVSEQGN SVSTGLHTKM 120 ESLGGSGIGS GGRVNWTMMS GNLGRPHVST GMWPSISGIG TGFVHNPNQT SLNFGSENSN 180 FLPKFGFHGF EFPNMNLGPM NLSAIMSGTN RQVVPGLELG LSQEGHIGMI NPQALSQFYQ 240 HMGQSRGDAD SLNQQQEPSD KDDSEESRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	6e-70	TCP family protein