PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904479.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Nin-like

Protein Properties

Length: 827aa MW: 91688.4 Da PI: 5.978

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.5	1.3e-28	530	581	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i le+l++yF++++kdA+k++gvc+T+LKriCRq+GI+RWP+Rkik++ XP_023904479.1 530 AEKTIPLEVLQQYFAGSLKDASKSIGVCPTTLKRICRQHGINRWPSRKIKKV 581 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 827 aa Download sequence
MENGFSAPGT ILGALPNSAM ELDLFDENFQ DRCWLEATEG LELLLQSPSS SGSVLGPSFV 60 WSALEARDNL SLNPSQTSNQ DEAQRPLPDE SQERSLVNAV SLGQNTVDVV AGCSSESENI 120 VIKGPKLGRR LWIAPNMNQG LTYCVEERLM KAIEYVREFT SGKDVLIQVW VPVNRDGRRV 180 LTTSNQPFAF GSSNPKLASY RDISADFHFA AEEDSKEVLG XMLSRAFLGK VPEWTPDVRF 240 FTKDEYFRIV HAQLYDVRGT LALPIFELGS SNCVGVIEVV MTAQQTKYGP ELESVCKALE 300 AVDLRSFDAL STENLKACPK SYQAALPEIQ EVLRFACKTH RLPLAQTWVP CIQQGKVGCR 360 HSNENYIYCV STVDRACIVA DPNMQEFHEA CSEHHLLKGE GIVGEAFKTN QPRFSSDITS 420 LSKTEYPLSH HARLFGLHAA VAIHLRSIHT GTDDFVLEFF LPTDCRDPEE QKNVLNSLSH 480 IIQQVCQSLQ VVTDKELEED TNLPECSMHG EGNFPSVGKA KAGEKRHTKA EKTIPLEVLQ 540 QYFAGSLKDA SKSIGVCPTT LKRICRQHGI NRWPSRKIKK VGHSIKKLQL VIDSVEGASG 600 ALQIDSFYTK FPKLASPNLS GTNPFSASKL SDHPQPILLP EGGIFSPQTA ASKSSYSSCS 660 QSSSSTHAPT RNVVCCKDPI VGENFSDSAL QRITSEAELH ASSQAPKLQP KLESLKSFNE 720 HPSAENFPPL QKLKVTYGDE KIRLRMKNNW GYKDLLLEIA CRFNIDDISR FDVKYLDDDS 780 EWVLLTCDDD LEECIDICRS SQSDTIKLAL QVSRHRVGRS LGSNATS

Sequence ? help Back to Top

Protein Sequence Length: 827 aa Download sequence

MENGFSAPGT ILGALPNSAM ELDLFDENFQ DRCWLEATEG LELLLQSPSS SGSVLGPSFV  60
WSALEARDNL SLNPSQTSNQ DEAQRPLPDE SQERSLVNAV SLGQNTVDVV AGCSSESENI  120
VIKGPKLGRR LWIAPNMNQG LTYCVEERLM KAIEYVREFT SGKDVLIQVW VPVNRDGRRV  180
LTTSNQPFAF GSSNPKLASY RDISADFHFA AEEDSKEVLG XMLSRAFLGK VPEWTPDVRF  240
FTKDEYFRIV HAQLYDVRGT LALPIFELGS SNCVGVIEVV MTAQQTKYGP ELESVCKALE  300
AVDLRSFDAL STENLKACPK SYQAALPEIQ EVLRFACKTH RLPLAQTWVP CIQQGKVGCR  360
HSNENYIYCV STVDRACIVA DPNMQEFHEA CSEHHLLKGE GIVGEAFKTN QPRFSSDITS  420
LSKTEYPLSH HARLFGLHAA VAIHLRSIHT GTDDFVLEFF LPTDCRDPEE QKNVLNSLSH  480
IIQQVCQSLQ VVTDKELEED TNLPECSMHG EGNFPSVGKA KAGEKRHTKA EKTIPLEVLQ  540
QYFAGSLKDA SKSIGVCPTT LKRICRQHGI NRWPSRKIKK VGHSIKKLQL VIDSVEGASG  600
ALQIDSFYTK FPKLASPNLS GTNPFSASKL SDHPQPILLP EGGIFSPQTA ASKSSYSSCS  660
QSSSSTHAPT RNVVCCKDPI VGENFSDSAL QRITSEAELH ASSQAPKLQP KLESLKSFNE  720
HPSAENFPPL QKLKVTYGDE KIRLRMKNNW GYKDLLLEIA CRFNIDDISR FDVKYLDDDS  780
EWVLLTCDDD LEECIDICRS SQSDTIKLAL QVSRHRVGRS LGSNATS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein