PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904255.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 364aa MW: 39324.4 Da PI: 4.4817

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904255.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.8	2.7e-36	37	128	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++lisw+++g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ Fk+g+k ll++ XP_023904255.1 37 FLTKTYQLVDDPAVDDLISWNDDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFKRGEKALLRE 122 9***************************************************************99.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_023904255.1 123 IQRRKI 128 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGPSPVEQSG DSGPGPGPGP GPGSVSGDSQ RSIPTPFLTK TYQLVDDPAV DDLISWNDDG 60 STFIVWRPAE FARDLLPKYF KHNNFSSFVR QLNTYGFRKV VPDRWEFAND CFKRGEKALL 120 REIQRRKISP ATGAIAVPPA AGVTVAAAGP AGVRTVSPSN SGDEQVISSN SSPAAAVHRS 180 TSCTTTPELL EENERLRKEN TQLSHELTQL RGLCNNIFAM MTTYASGQLD VGGGVNGNVN 240 GNGVAVSIPE GKPLDLLPSK QVTVTEDIDV GVGVCGGANM GGDEEEEEDE TTPRLFGFRI 300 GVKRVRRSVE EEEVELEEER EGRNGENMEN SQEKESGSEV KSEPLDQNGN SDHRDPLWLE 360 LGKK

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGPSPVEQSG DSGPGPGPGP GPGSVSGDSQ RSIPTPFLTK TYQLVDDPAV DDLISWNDDG  60
STFIVWRPAE FARDLLPKYF KHNNFSSFVR QLNTYGFRKV VPDRWEFAND CFKRGEKALL  120
REIQRRKISP ATGAIAVPPA AGVTVAAAGP AGVRTVSPSN SGDEQVISSN SSPAAAVHRS  180
TSCTTTPELL EENERLRKEN TQLSHELTQL RGLCNNIFAM MTTYASGQLD VGGGVNGNVN  240
GNGVAVSIPE GKPLDLLPSK QVTVTEDIDV GVGVCGGANM GGDEEEEEDE TTPRLFGFRI  300
GVKRVRRSVE EEEVELEEER EGRNGENMEN SQEKESGSEV KSEPLDQNGN SDHRDPLWLE  360
LGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11660.1	2e-86	HSF family protein