PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023903493.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 1014aa MW: 110964 Da PI: 5.6847

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023903493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.9	2.3e-18	37	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_023903493.1 37 KGQWTPEEDEILQKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799**************************9.**********986 PP
2	Myb_DNA-binding	64.4	2.2e-20	89	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde ++++vk++G++ W+tIa++++ gR +kqc++rw+++l XP_023903493.1 89 KGPWSKEEDEVIIELVKKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 135 79****************************.***********97 PP
3	Myb_DNA-binding	48.6	1.8e-15	141	183	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_023903493.1 141 KEAWTQEEELALIRAHQIYGNR-WAELTKFLP-GRTDNAIKNHWN 183 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1014 aa Download sequence
MEGDRKISTT QDGLGDASQK MRALQGRTSG PTRRSTKGQW TPEEDEILQK AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI IELVKKYGPK KWSTIAQHLP 120 GRIGKQCRER WHNHLNPSIN KEAWTQEEEL ALIRAHQIYG NRWAELTKFL PGRTDNAIKN 180 HWNSSVKKKL DSYLASGLLA HYPVLPHVGH RNQSMLSSSS RMQSSGDDSG LKGIEGEEIS 240 ECSQDSTVAG CFQSASEMAN AVLHNIEELP LTQESGLAKE QNSSPLSCSE QYYTSLEDVA 300 FSMPDISCEA GCPDKLLEQN FSHDAKASVS RENKFNAHGL PNISSLELGQ DSSQLQTHCI 360 STNESHEMVN VPCQASTSMG YMAMGSYNKA EHMLIPDDEC CRVLFSEAMN DGNFFTGNLT 420 KGSNMVASVG GTDSFRCQSS NSMISETVAT SASQSYCPPR SDIIGTSCSQ HFVPAPSLIS 480 VDGGTLIYSD EPNQLFETQE QEFVISAPDG FVYTKDSPNS PCNNGTKNTG LQEQPDFVKE 540 PSKLVPVNSF GSGSDINHTC PSLGEGSYVH TEQQDVGALC YEPPRFPSLD IPFFSCDLVQ 600 SGSDMQQQEY SPLGIRQLMM SSMNCLTPFR LWDSPSRDDS PDAVLKSAAK TFTGTPSILK 660 KRHRDLLSPL SDRRIDKKLE IDMTSSLARD FSRLDVMFAD SGTQKAPLLS PSSNRKKNSG 720 TSTDDKENLD HAFEEGDEGV AHISSGVLVE HDMNNLLLNS PDQVGSKADR ALLGSSAGTP 780 RNQQSRSLGA ASNQGIPNKS SFGNPCAPVS SPTVCVKKHE SHSVGVTCLQ SASLSVPLEN 840 RSDNAGNDAS FETFGMFGGT PFKRSIESPS AWKSPWFINS FLPGPRVDTD ITIEDIGYLM 900 SPGDRSYDAI GLMKQISEQS AAAYANAQEV LGNETPKTLL KGKSINQGNL DRENSHMPHD 960 PLGNRSHLAP NVLTECRILD FSECGTPAKG TENSRSSNAL SFSSPSSYLL KGCR

Sequence ? help Back to Top

Protein Sequence Length: 1014 aa Download sequence

MEGDRKISTT QDGLGDASQK MRALQGRTSG PTRRSTKGQW TPEEDEILQK AVQRFKGKNW  60
KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI IELVKKYGPK KWSTIAQHLP  120
GRIGKQCRER WHNHLNPSIN KEAWTQEEEL ALIRAHQIYG NRWAELTKFL PGRTDNAIKN  180
HWNSSVKKKL DSYLASGLLA HYPVLPHVGH RNQSMLSSSS RMQSSGDDSG LKGIEGEEIS  240
ECSQDSTVAG CFQSASEMAN AVLHNIEELP LTQESGLAKE QNSSPLSCSE QYYTSLEDVA  300
FSMPDISCEA GCPDKLLEQN FSHDAKASVS RENKFNAHGL PNISSLELGQ DSSQLQTHCI  360
STNESHEMVN VPCQASTSMG YMAMGSYNKA EHMLIPDDEC CRVLFSEAMN DGNFFTGNLT  420
KGSNMVASVG GTDSFRCQSS NSMISETVAT SASQSYCPPR SDIIGTSCSQ HFVPAPSLIS  480
VDGGTLIYSD EPNQLFETQE QEFVISAPDG FVYTKDSPNS PCNNGTKNTG LQEQPDFVKE  540
PSKLVPVNSF GSGSDINHTC PSLGEGSYVH TEQQDVGALC YEPPRFPSLD IPFFSCDLVQ  600
SGSDMQQQEY SPLGIRQLMM SSMNCLTPFR LWDSPSRDDS PDAVLKSAAK TFTGTPSILK  660
KRHRDLLSPL SDRRIDKKLE IDMTSSLARD FSRLDVMFAD SGTQKAPLLS PSSNRKKNSG  720
TSTDDKENLD HAFEEGDEGV AHISSGVLVE HDMNNLLLNS PDQVGSKADR ALLGSSAGTP  780
RNQQSRSLGA ASNQGIPNKS SFGNPCAPVS SPTVCVKKHE SHSVGVTCLQ SASLSVPLEN  840
RSDNAGNDAS FETFGMFGGT PFKRSIESPS AWKSPWFINS FLPGPRVDTD ITIEDIGYLM  900
SPGDRSYDAI GLMKQISEQS AAAYANAQEV LGNETPKTLL KGKSINQGNL DRENSHMPHD  960
PLGNRSHLAP NVLTECRILD FSECGTPAKG TENSRSSNAL SFSSPSSYLL KGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein