PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023903400.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 419aa    MW: 46448.4 Da    PI: 8.3719
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023903400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.4e-11347392655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el P+     +k  + a++L +AveYIk+Lq
  XP_023903400.1 347 SIAERVRRTRISERMRKLQELFPNM----DKQTNTADMLDLAVEYIKDLQ 392
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MSLLYSPTFK YSDVKLKKNH LDFMDSNTYH HPQQQQQQQQ QQHQQQQHQQ QHQHNSGLMR  60
YRSAPSSLLA NLVDGSINGG GGGVGCEDYR DLRSSNPEVE TMLAFMTSSN SSGDSNSQMV  120
YQAQAAQQVQ ALPNHNSVGA GTTLDSSFSG LNSVGLENSM QAKMGAGNRS NLVRQSSLPP  180
GLFSDLTIDN GFAVMRDVGT FRACNDTNGE ASPSMTKLND QLSFSARRLP QIAEIGNEIT  240
SPEDQSLGNA NGSNQQYIPK FTSDSWDESA FNSLRRARDN EGNMFPTSNA LETQNADSGN  300
QTHRLTHHLS LPKTSVEMAA IEKFLQFQGS VPCKIRAKRG CATHPRSIAE RVRRTRISER  360
MRKLQELFPN MDKQTNTADM LDLAVEYIKD LQKQVKTLTD TKAKCSCSSK QKQYSNHSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.14e-64bHLH family protein