PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023903284.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 352aa    MW: 39235.9 Da    PI: 6.574
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023903284.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.82.2e-14166212354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  XP_023903284.1 166 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 212
                     79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MCGKKEEDQG ECSQSVNNIN IQSFQEQLLL QQHQQMQQHH HHQQQQQNSD IYGGGRGLIF  60
PEPILQPWSL PPVHAFNQAH FATNPVRDHD PFLVPPPPSS YASLFNRRAP SLQFAYDGPS  120
SDHLRIISDT LGPVVQSGSA PFGLQAELGK LTAQEIMDAK ALAASKSHSE AERRRRERIN  180
NHLAKLRSLL PSTTKTDKAS LLAEVIQHVK ELKRQTSLIA ETSPVPTEVD ELTVDTSDED  240
GKFVIKASLC CEDRSDLLPD LIKTLKALRL RTLKAEITTL GGRVKNVLFI TGEEDSSSSD  300
EQNQNQQQQQ YCISSIQDAL KAVMEKTNGD ESSSGNVKRQ RTNVNILEHR SI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172177ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-91bHLH family protein