PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023902457.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 356aa    MW: 38692.6 Da    PI: 8.1598
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023902457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H223.41.5e-07123143323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     Cp C+k F+rk+n+++H rtH
  XP_023902457.1 123 CPECNKAFTRKDNMEQHRRTH 143
                     ********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MDDLNHASLY PPIPDATGAI PPSAYPMPMP IVQMPALQQM QAIPASPVHM QPAQQPHRAS  60
TSPASEPSRV SAHSAASNAK TQSKKNQYPC PMAKQFGCTD FFTTSGHAAR HAKKHTGKKD  120
AFCPECNKAF TRKDNMEQHR RTHQNGRGAS RSTTSAPSDD SKVKKSTKQA VKKTVAKAEP  180
QLEAAVEQQL AEQQQQQELL QHQQQQQHRQ QLLDSQMIPQ VATLPVQQSM LPQGLLDQSM  240
MMPPTCGPYF MGGNGMDAIP VASLPMAMPD LSSRPQLQRS SYGMNSLDYV APAAPMTISE  300
EGLHYSYPSP GLSNGLNSLA LAASEHQRLS QEKALSTSPS CEQMRDSPSS LSDETP