PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023902008.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family BBR-BPC
Protein Properties Length: 315aa    MW: 35402.1 Da    PI: 10.1314
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023902008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind3698.9e-11313151301
       GAGA_bind   1 mdddgsre..rnkg.yye..............pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalver 77 
                     mdd  ++e  r+k  yy+              ++ ++l   +++++ms+iaerda+irern+alsek++a+a+rd+a+ qrd+a+a+r+ al+er
  XP_023902008.1   1 MDDGRQHEngRHKLdYYRgphspwnimsqhqvKEpNALV--MNKKIMSIIAERDAAIRERNAALSEKNEALAARDEALRQRDEAFAQRDTALMER 93 
                     666665555888887898999999999876663335666..99**************************************************** PP

       GAGA_bind  78 dnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrak...kpkekkakkkkk 169
                     dn+l+al++++n+   + p g ++ +g+k ++++ + +  ++++ ++ +++ ++++a+pi+  a+ea ++++ k+++++k   ++ +k  +k+kk
  XP_023902008.1  94 DNALAALQVRDNG--INFPLGGGIQRGSKRMHHSSN-HMVNMAEAPYSTKDAQITDAFPITVIASEAVKSHQAKRTKENKavsSKTSKSPRKPKK 185
                     ************9..5678899999*******8887.779*******************998888777776666555554000444444558888 PP

       GAGA_bind 170 ksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqga 264
                      +e+ +++ ++++   + ++e++s+dl+ln v++Dest+PvPvC+CtG++rqCYkWGnGGWqS+CCtt +S+yPLP+++++r+aR++grKmS+++
  XP_023902008.1 186 VGEDLNRQAASDGI--KYRSEWDSQDLGLNLVTFDESTMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTRMSMYPLPQMPNKRHARVGGRKMSGSV 278
                     88888888888875..69***************************************************************************** PP

       GAGA_bind 265 fkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     f++lL++LaaeG+dls p+DLkd+WA+HGtn+++ti+
  XP_023902008.1 279 FTRLLSRLAAEGHDLSLPLDLKDYWARHGTNRYITIK 315
                     ************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDDGRQHENG RHKLDYYRGP HSPWNIMSQH QVKEPNALVM NKKIMSIIAE RDAAIRERNA  60
ALSEKNEALA ARDEALRQRD EAFAQRDTAL MERDNALAAL QVRDNGINFP LGGGIQRGSK  120
RMHHSSNHMV NMAEAPYSTK DAQITDAFPI TVIASEAVKS HQAKRTKENK AVSSKTSKSP  180
RKPKKVGEDL NRQAASDGIK YRSEWDSQDL GLNLVTFDES TMPVPVCTCT GVPRQCYKWG  240
NGGWQSSCCT TRMSMYPLPQ MPNKRHARVG GRKMSGSVFT RLLSRLAAEG HDLSLPLDLK  300
DYWARHGTNR YITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-134BBR-BPC family protein