PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023901383.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CAMTA

Protein Properties

Length: 1095aa MW: 122886 Da PI: 5.3664

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023901383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	177.3	1.9e-55	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ ++rwl++ ei++iL n+++++++ e+++ p++gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+e+n++fqr XP_023901383.1 20 IEAQSRWLRPAEICEILRNYKNFRIAPEPANMPPNGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEDNENFQR 114 56699**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+ywlLeeel++ivlvhy+evk XP_023901383.1 115 RSYWLLEEELSHIVLVHYREVK 136 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1095 aa Download sequence
MAESRRYVLG NQLDIEQILI EAQSRWLRPA EICEILRNYK NFRIAPEPAN MPPNGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDNE NFQRRSYWLL 120 EEELSHIVLV HYREVKGNRT SCNRIKETEE AIPYSQETEP NSEIDSSGSS CFHPNNYQIT 180 SQNTDTTSLN SSAQASEYED AESACNYQTS SGLHSLFDLQ QPMVEKINAG LTEPYFPGPI 240 SDDYQGKFPT ISEVDFASLT QADKTKDGNN AALKILDFPL WEDVLGNGTS GTQSVTFEPS 300 FLETKPDTTG GLSKQENPIL GQHFTSNLGE KREIGSHSHA QKEWQASEGK WHLDQNVLAE 360 SVYGVTFNEQ DGNWVKLLNS REPLLPKTDK QDNDPMQSNL QVQLSDADHG YLKSNPEINM 420 ALEGKTNSSF TIKQTRLDGS LREENLKKLD SFNRWMSKEL GDVNESHTQS SSEAYWDTVE 480 SENRADESNI SPQVHLDNYT LGPSLQDQLF SIIDFSPNWA FEGSKVKVLI TGRFLKSQQE 540 IENFKWSCMF GEVEVPAEVI ADGVIRCYTP VHKAARIPFY VTCSNRLACS EVREFEYRVS 600 LIKDVDIIDY SGSTNDDLLM RFKIFLSLTS AGPPSTDSVI GSDKSQVSSK ISSLLEGDND 660 EWDQMLKLAS EKDFSPEKVQ DRLLEKLLKE KLHVWLLQKA AEDGKGPSVL DENGQGVLHF 720 AAALGYDWAL EPTIIAGVSV NFRDVNGWTA LHWAAFCGRE RTVASLVSLG AAPGALTDPS 780 PQFPAGRTAA DLASANGHKG IAGYLAESHL STHLSSLKLD TGDGDAAEIS GAKAVQKVSE 840 RSATPVSDGD LPYGLSLKDS LAAVCNASQA YARIYQVFRV ESFNKKQLKE YGDDTFGMSD 900 EQALSLLALK TNKSGQHDLP VQAAAIRIQN KFRSWKGRRE FLIIRQRIVK IQAHVRGHQV 960 RKNYKKFTWS VGIVEKIILR WRRKGSGLRG FKSEALTEGH RMPDKSSEDD YDFLKEGRKQ 1020 TEQRLQKALA RVKSMAQYPD ARDQYRRLLN VVTDIQGSKV VGDGVPSSSE ETADYNDEMI 1080 DFEAFLDDDT YMPSA

Sequence ? help Back to Top

Protein Sequence Length: 1095 aa Download sequence

MAESRRYVLG NQLDIEQILI EAQSRWLRPA EICEILRNYK NFRIAPEPAN MPPNGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDNE NFQRRSYWLL  120
EEELSHIVLV HYREVKGNRT SCNRIKETEE AIPYSQETEP NSEIDSSGSS CFHPNNYQIT  180
SQNTDTTSLN SSAQASEYED AESACNYQTS SGLHSLFDLQ QPMVEKINAG LTEPYFPGPI  240
SDDYQGKFPT ISEVDFASLT QADKTKDGNN AALKILDFPL WEDVLGNGTS GTQSVTFEPS  300
FLETKPDTTG GLSKQENPIL GQHFTSNLGE KREIGSHSHA QKEWQASEGK WHLDQNVLAE  360
SVYGVTFNEQ DGNWVKLLNS REPLLPKTDK QDNDPMQSNL QVQLSDADHG YLKSNPEINM  420
ALEGKTNSSF TIKQTRLDGS LREENLKKLD SFNRWMSKEL GDVNESHTQS SSEAYWDTVE  480
SENRADESNI SPQVHLDNYT LGPSLQDQLF SIIDFSPNWA FEGSKVKVLI TGRFLKSQQE  540
IENFKWSCMF GEVEVPAEVI ADGVIRCYTP VHKAARIPFY VTCSNRLACS EVREFEYRVS  600
LIKDVDIIDY SGSTNDDLLM RFKIFLSLTS AGPPSTDSVI GSDKSQVSSK ISSLLEGDND  660
EWDQMLKLAS EKDFSPEKVQ DRLLEKLLKE KLHVWLLQKA AEDGKGPSVL DENGQGVLHF  720
AAALGYDWAL EPTIIAGVSV NFRDVNGWTA LHWAAFCGRE RTVASLVSLG AAPGALTDPS  780
PQFPAGRTAA DLASANGHKG IAGYLAESHL STHLSSLKLD TGDGDAAEIS GAKAVQKVSE  840
RSATPVSDGD LPYGLSLKDS LAAVCNASQA YARIYQVFRV ESFNKKQLKE YGDDTFGMSD  900
EQALSLLALK TNKSGQHDLP VQAAAIRIQN KFRSWKGRRE FLIIRQRIVK IQAHVRGHQV  960
RKNYKKFTWS VGIVEKIILR WRRKGSGLRG FKSEALTEGH RMPDKSSEDD YDFLKEGRKQ  1020
TEQRLQKALA RVKSMAQYPD ARDQYRRLLN VVTDIQGSKV VGDGVPSSSE ETADYNDEMI  1080
DFEAFLDDDT YMPSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein