PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023900266.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family BBR-BPC
Protein Properties Length: 337aa    MW: 37583.4 Da    PI: 9.7162
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023900266.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind390.13.2e-11913371301
       GAGA_bind   1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                     mdd g+re  r+k+ +y+ a  + l +++   +q+ms++aerda+i+ernla++ekkaa+aerdmafl+rd+a+aern+a++erdn++++l+++e
  XP_023900266.1   1 MDDGGHREngRHKAdQYKTAqsQWLMQHQpsMKQIMSIMAERDAAIQERNLAVAEKKAAIAERDMAFLERDTAIAERNNAMLERDNAIATLQFRE 95 
                     9*****999*****9**95443334444321469************************************************************* PP

       GAGA_bind  89 nsla...salpvgvqvlsgtksidslqqlse....pqledsavelreeeklealpie...eaaeeakekkkkkkrq..rakkpkekkakkkkkks 171
                     ns +   +++p+g+q+++g+k+i++ q +++    p+++++++++re+++++ l ++   ++a +++++k++k+++  ++ k+ +k+ +k k++s
  XP_023900266.1  96 NSFTsgnMSCPPGCQISRGVKHIHHPQAQQHmhhvPHMGEPSYNTREMHTSDGLAMSpvaSEAAKSRRAKRTKETKgiSSDKKAAKTPRKIKRES 190
                     *98888899****************9986666789**************9986655500044444444444333331123333344455777777 PP

       GAGA_bind 172 ekskkkvkkesader.................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstk 249
                     ++ ++   k+++ ++                  k+++k +dl+ln+v++Dest+P+PvCsCtG+lrqCYkWGnGGWqS+CCttt+S+yPLP++++
  XP_023900266.1 191 DDLNNMFGKPNEWKSeqdmgsggddlnrqtgvPKTDWKGQDLGLNQVAFDESTMPAPVCSCTGILRQCYKWGNGGWQSSCCTTTLSMYPLPAVPN 285
                     777777666665433689*************99************************************************************** PP

       GAGA_bind 250 rrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     +r+aR++grKmS++af+klL++LaaeG+dlsnpvDLk+ WAkHGtn+++ti+
  XP_023900266.1 286 KRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKENWAKHGTNRYITIK 337
                     ***************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MDDGGHRENG RHKADQYKTA QSQWLMQHQP SMKQIMSIMA ERDAAIQERN LAVAEKKAAI  60
AERDMAFLER DTAIAERNNA MLERDNAIAT LQFRENSFTS GNMSCPPGCQ ISRGVKHIHH  120
PQAQQHMHHV PHMGEPSYNT REMHTSDGLA MSPVASEAAK SRRAKRTKET KGISSDKKAA  180
KTPRKIKRES DDLNNMFGKP NEWKSEQDMG SGGDDLNRQT GVPKTDWKGQ DLGLNQVAFD  240
ESTMPAPVCS CTGILRQCYK WGNGGWQSSC CTTTLSMYPL PAVPNKRHAR VGGRKMSGSA  300
FNKLLSRLAA EGHDLSNPVD LKENWAKHGT NRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-150BBR-BPC family protein