PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900205.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 345aa MW: 37143.8 Da PI: 5.8928

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	20	41	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C +C+++F+++ L H+r+H XP_023900205.1 20 SCFYCKMVFNNHQALGAHLRVH 41 7*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MNPYLPSDKE NAEKHVGLLS CFYCKMVFNN HQALGAHLRV HQEEINAWKS WNYPVHSSTF 60 IDGTSSALNP ISMSLPDNSS GGAWSNPSTL FSGVTSNLGF SNFCSNESSW VNANNYSQNN 120 VGYARSQYFM SPNLSYGSGS GSASAGFHPS APSSSTFFIP SASPATPGFP MGPSSYFNSY 180 GACQFNADEL RTFRDGMPFP PRCDLPNFHH HNLSNLSYPA YSINDPASGV GSNQLTGMKE 240 SNTVGSVPPG HGQCSGQTGV GKYNNTSALT CEGGRKRCLS EVLGNSDMMN SSKRPQTSSS 300 LHAETEKPQK KELLLFKDVE DSFAGLGFSV DDEEGEADLD LSLHL

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MNPYLPSDKE NAEKHVGLLS CFYCKMVFNN HQALGAHLRV HQEEINAWKS WNYPVHSSTF  60
IDGTSSALNP ISMSLPDNSS GGAWSNPSTL FSGVTSNLGF SNFCSNESSW VNANNYSQNN  120
VGYARSQYFM SPNLSYGSGS GSASAGFHPS APSSSTFFIP SASPATPGFP MGPSSYFNSY  180
GACQFNADEL RTFRDGMPFP PRCDLPNFHH HNLSNLSYPA YSINDPASGV GSNQLTGMKE  240
SNTVGSVPPG HGQCSGQTGV GKYNNTSALT CEGGRKRCLS EVLGNSDMMN SSKRPQTSSS  300
LHAETEKPQK KELLLFKDVE DSFAGLGFSV DDEEGEADLD LSLHL