PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023900138.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 193aa    MW: 21680.3 Da    PI: 8.4917
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023900138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.9e-11249454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  XP_023900138.1  2 SHIAVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGVIEFIKEL 49
                    89************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSHIAVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GVIEFIKELH QVLQSLESKK  60
RRKSLSPSPA PSPKPLLQLT PPQLDCPFIG FEHVKELGAS CNSPVADVEA KISGSNVVLK  120
IISKRIPGQI LKIISVLERL QFEVLHLNIS SMEDAALYSF VIKIGLECQL SVEELAIEVQ  180
RSFCSETIYA NEF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.13e-75bHLH family protein