PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023899812.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 265aa    MW: 30014.6 Da    PI: 8.4432
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023899812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.48.2e-34181581128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk...... 79 
                     lp+G++F+Ptd+e++ e+L++k+ +++      ++  e   +++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      
  XP_023899812.1  18 LPAGVKFDPTDHEIL-EHLEAKILSDTrklhplID--EfipTLEGEnGICYTHPEKLP-GVSKDGQIRHFFHRPSKAYTTGTRKRRKVHtdedgs 108
                     799***********9.99****9999956644322..22222333336**********.555666777******************744446555 PP

             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     + +W++tgk+++v++ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_023899812.1 109 ETRWHKTGKTRPVFV-GGAVKGYKKILVLYtnYGRQRKPEKTNWVMHQYHL 158
                     788************.9*************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MWKVTSCDEA GIHDLPGLPA GVKFDPTDHE ILEHLEAKIL SDTRKLHPLI DEFIPTLEGE  60
NGICYTHPEK LPGVSKDGQI RHFFHRPSKA YTTGTRKRRK VHTDEDGSET RWHKTGKTRP  120
VFVGGAVKGY KKILVLYTNY GRQRKPEKTN WVMHQYHLGN NEEEKDGELV VSKVFYQTQP  180
RQCGSSTKDS LNNQSVHDNS PNEIPIPKNP SALLEYYNSP FINYDQGGHN RESPPQLIPN  240
LVVQGDGSSF VRLAADASKG NYERK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28470.11e-116NAC family protein