PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023898448.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 922aa MW: 101526 Da PI: 6.8518

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023898448.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56	7.3e-18	333	432	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_023898448.1 333 FEKMLSASDAGRIGRLVLPKACAEAYfpAISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 425 89************************666667778***********99899999999.*******************876.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 l +++++ XP_023898448.1 426 LIMGFRK 432 7777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 922 aa Download sequence
MASSNSKKTC MNVLCGESTS ADSKKGWALR SGDFAKLCDK CGSVYEQSIF CDVYHSKDSG 60 WRECTSCGKR LHCGCITSIS LVELLDCGGV SCINCAKNTG LVPISSNEKP DGFGTSKVDN 120 VNELHPSSMD TQLDGNSIEK LKLMQLGNSI EGNGLRHLLQ SHNADTIGSF GKLKEEEVFP 180 SVGEIGTACF SNFDQACNGS SNTTKPDIYK ANMGTKDIYE SLPQTNLSMT LGAPSGNSSP 240 LPSAVVDERE NRKTSSPFLQ GPRSRHLLPK PPRSALAGGL EANAGMVSQI RVARPPAEGR 300 GRNQLLPRYW PRITDQELQQ ISGDSNSTIV PLFEKMLSAS DAGRIGRLVL PKACAEAYFP 360 AISQPEGLPL RIQDVKGKEW VFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ AGDTVTFSRM 420 DPEGKLIMGF RKASNSVAMQ DTYPSAIPNG AHSSETLFSG IFENLPIISG YSGLLQSLKG 480 SADPNLNALS KHLSSATGDI SWHKSEKLED RTREGLLLLP ERKKARNIGS KSKRLLIDSQ 540 DVLELKLTWE EAQDLLYPPP TFKPSIVMIE DHEFEEYEEP PVFGKRSIFV ARSTGLIFRV 600 QEQWAQCDSC SKWRRLPVDI LIPPKWTCAD NAWDQSRCSC SAPDELNPRE LENLLRLNKE 660 FKKRRTMTSN RPNQGHESSG LDALANAAIL GDSVGDPGTT SVATTTKHPR HRPGCSCIVC 720 IQPPSGKGKH KPTCTCNVCM TVKRRFKTLM MRKKKRQSER EAEIAQRNQQ TWGSRDEAEV 780 DSTSRHASSH LDPSENEARS ANELESKSQS KLVDTGKGHL DLNCHPDREE ELQAGSKRMS 840 MMSLLQEASL PLETYLKQNG LTLTSLITEQ QASSASQIPP QASNENEGQL NEDCCFVSAE 900 QEREGSREEY CGPDPSQNDA QS

Sequence ? help Back to Top

Protein Sequence Length: 922 aa Download sequence

MASSNSKKTC MNVLCGESTS ADSKKGWALR SGDFAKLCDK CGSVYEQSIF CDVYHSKDSG  60
WRECTSCGKR LHCGCITSIS LVELLDCGGV SCINCAKNTG LVPISSNEKP DGFGTSKVDN  120
VNELHPSSMD TQLDGNSIEK LKLMQLGNSI EGNGLRHLLQ SHNADTIGSF GKLKEEEVFP  180
SVGEIGTACF SNFDQACNGS SNTTKPDIYK ANMGTKDIYE SLPQTNLSMT LGAPSGNSSP  240
LPSAVVDERE NRKTSSPFLQ GPRSRHLLPK PPRSALAGGL EANAGMVSQI RVARPPAEGR  300
GRNQLLPRYW PRITDQELQQ ISGDSNSTIV PLFEKMLSAS DAGRIGRLVL PKACAEAYFP  360
AISQPEGLPL RIQDVKGKEW VFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ AGDTVTFSRM  420
DPEGKLIMGF RKASNSVAMQ DTYPSAIPNG AHSSETLFSG IFENLPIISG YSGLLQSLKG  480
SADPNLNALS KHLSSATGDI SWHKSEKLED RTREGLLLLP ERKKARNIGS KSKRLLIDSQ  540
DVLELKLTWE EAQDLLYPPP TFKPSIVMIE DHEFEEYEEP PVFGKRSIFV ARSTGLIFRV  600
QEQWAQCDSC SKWRRLPVDI LIPPKWTCAD NAWDQSRCSC SAPDELNPRE LENLLRLNKE  660
FKKRRTMTSN RPNQGHESSG LDALANAAIL GDSVGDPGTT SVATTTKHPR HRPGCSCIVC  720
IQPPSGKGKH KPTCTCNVCM TVKRRFKTLM MRKKKRQSER EAEIAQRNQQ TWGSRDEAEV  780
DSTSRHASSH LDPSENEARS ANELESKSQS KLVDTGKGHL DLNCHPDREE ELQAGSKRMS  840
MMSLLQEASL PLETYLKQNG LTLTSLITEQ QASSASQIPP QASNENEGQL NEDCCFVSAE  900
QEREGSREEY CGPDPSQNDA QS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	743	754	KRRFKTLMMRKK
2	743	756	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein