PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023897204.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 281aa    MW: 30745.9 Da    PI: 7.0006
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023897204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.33.7e-17229265135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgp+g+ktLCnaCGl++++kg+
  XP_023897204.1 229 CRHCGISEkfTPMMRRGPEGPKTLCNACGLMWASKGT 265
                     ******999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDDIHEDNVR MHMSEAQHPM QFQYEHHGLH HMSNGNVNGM DDNHHHDNGN VNGSGGGGNE  60
GYEGDVPSDA GNLSDNRSAM VDQVGGDIGD QLTLSFQGQV YVFDSVSPEK VQAVLLLLGG  120
REVPPNMPAI PATVHNNNQG ISGTPQRLSV PQRNASLARF REKRKERNFD KKIRYTVRKE  180
VALRMQRNKG QFTSSKSNND DSASAVTSWG SDESWGPDGN GSQHLEIVCR HCGISEKFTP  240
MMRRGPEGPK TLCNACGLMW ASKGTLRDLS RAAPKAGQNS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-111GATA family protein