PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023896347.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 290aa    MW: 32172.8 Da    PI: 9.3786
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023896347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-13106150347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rWT+eE++l++ + ++lG g+Wk I+r + ++R++ q+ s+ qk+
   XP_023896347.1 106 RWTEEEHKLFLIGLEKLGRGDWKGISRDFVTTRSPAQVASHAQKH 150
                      9******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MVRGSVIVRR CSQCRLSGHN FTTCSKKNNN NITTTIASGN NNSNNASTTI ANYNNNNAGL  60
IKIFGVYFPK NVDDHDLNSS VSMENRSSKS VEREVDIDAE RKKGRRWTEE EHKLFLIGLE  120
KLGRGDWKGI SRDFVTTRSP AQVASHAQKH YMRQVAIDDK KKNRPSVFDL SLNEDELAPK  180
DSSVSHTEKS GIEKALKASN SQALALVNNN ENPIEATTAY QHNVNQSPHV ALDIPPIAQM  240
PPPVFGAPNY CRSPSTVNSA SQSYSSWLPG TLQNSVFHHH RHSSHIVVLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.14e-31MYB_related family protein