PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895803.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 358aa MW: 40031.5 Da PI: 8.8654

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895803.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_023895803.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.2e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_023895803.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MFQHKKPSTM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHTIK DGMRASALEL QRNTASSSSI 120 MARSMNEMQM EVQRRLHEQL EVQRHLQLRI EAQGKYMQSI LEKACQTLAG ENSMPSASYK 180 SIGTQGLGDM GSSAMKDFGS PLNFPSFQDL NIYGGDQLDL QHMDRPPLDG LMMGNNDSIC 240 LGKKRNSPYG GSGKSPLIWS DDLRLQDLGS APSCLRPQDD PFKGDQIQIS PPSIDRSSDM 300 DNISDIYETK PVLQSDEKKF ESVKLERPSP RRGPLATDRM NPMINTGSMT QGRNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MFQHKKPSTM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHTIK DGMRASALEL QRNTASSSSI  120
MARSMNEMQM EVQRRLHEQL EVQRHLQLRI EAQGKYMQSI LEKACQTLAG ENSMPSASYK  180
SIGTQGLGDM GSSAMKDFGS PLNFPSFQDL NIYGGDQLDL QHMDRPPLDG LMMGNNDSIC  240
LGKKRNSPYG GSGKSPLIWS DDLRLQDLGS APSCLRPQDD PFKGDQIQIS PPSIDRSSDM  300
DNISDIYETK PVLQSDEKKF ESVKLERPSP RRGPLATDRM NPMINTGSMT QGRNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-137	G2-like family protein