PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895087.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 836aa MW: 96474.1 Da PI: 6.4453

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895087.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.5	4.4e-23	157	243	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y++YA GFs+rk+ +ks+ ng +++r+++C+++g+r ++ ++ + r++r+etrtgC a++++ ++ +gk++vt++e++HnHe++ XP_023895087.1 157 CYSRYAVLEGFSIRKDFVNKSRVNGAVVSRRYTCYRQGYRPTKYNS--NVRKSRQETRTGCLAHMTIARQPNGKFRVTHFETKHNHEFV 243 7*************************************999888..9999*********************************97 PP
2	FAR1	92.1	7.3e-29	291	379	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA +vGFsvrk++ ++sk +g + +r+f+C +eg+r+++k++ + +r+r+etr+gC a+l+++++ dgk++vt++e++HnHel+ XP_023895087.1 291 EFYNTYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRD-MNVKRPRKETRIGCLAQLVISRQPDGKYRVTHFEEKHNHELV 379 6*****************************************999.99************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 836 aa Download sequence
MGSGEPDITG HPREKDIENE CQTSSTFVID TEQESQSPKE SFVEQGQVVI GGERESQSPT 60 VSSVDKSQVV IDSDHDSETP SVSSVDKSQE EIDGEDCQIP RVSNVSKFEM DVAGEQECQN 120 PNAISAGVSV VVKSEDDVYV IPKVGMEFES EDDAYKCYSR YAVLEGFSIR KDFVNKSRVN 180 GAVVSRRYTC YRQGYRPTKY NSNVRKSRQE TRTGCLAHMT IARQPNGKFR VTHFETKHNH 240 EFVTPSTAHK LPSQKRLKFA QAVEADSTSH SGMDGVPKLG MGFDSEDHAY EFYNTYAGRV 300 GFSVRKDYVN RSKIDGAVAS RRFTCFREGF RQKDKRDMNV KRPRKETRIG CLAQLVISRQ 360 PDGKYRVTHF EEKHNHELVA ACRIRMLRSQ KRLAVAQVVD GNFVDGSKIE PKSACELQYK 420 MIGDCEYIGY DPIDYKNKLP SRRMRELREG EAERMQQYFQ SKQLKNPSFF YAIQLDVDDQ 480 IANVFWADAK MVVDYSDFGD VVCFDTTCRL YRDCRPFATF IGMNHHKQMV IFGAALLYDE 540 TVESFKWLFR TFIEAMSGKK PKTILTDEDA TITEAIDLIL PGTPHRMCVW HVYQNALKQL 600 NHMFVDSGSF INDLSSCFFE HEEEEDFING WKAMLDVYGL WENDWLHEIF ECREKWAVVY 660 GRHNFCADLK SALLRENFTA TLKKYLKSDS DVLPFFKHLG KVVNEWHYKE LEANFDMSQH 720 MPRLMGDVIM LKQARDIYTP KIFELFQLEY ETCLNIVVNQ CTESESLFEY KVSIYGQPRE 780 YTVTFNSTDE TVACNCMKFE FMGVLCSHAL KVLDYRNIKL LPTKYILKRW TKDARV

Sequence ? help Back to Top

Protein Sequence Length: 836 aa Download sequence

MGSGEPDITG HPREKDIENE CQTSSTFVID TEQESQSPKE SFVEQGQVVI GGERESQSPT  60
VSSVDKSQVV IDSDHDSETP SVSSVDKSQE EIDGEDCQIP RVSNVSKFEM DVAGEQECQN  120
PNAISAGVSV VVKSEDDVYV IPKVGMEFES EDDAYKCYSR YAVLEGFSIR KDFVNKSRVN  180
GAVVSRRYTC YRQGYRPTKY NSNVRKSRQE TRTGCLAHMT IARQPNGKFR VTHFETKHNH  240
EFVTPSTAHK LPSQKRLKFA QAVEADSTSH SGMDGVPKLG MGFDSEDHAY EFYNTYAGRV  300
GFSVRKDYVN RSKIDGAVAS RRFTCFREGF RQKDKRDMNV KRPRKETRIG CLAQLVISRQ  360
PDGKYRVTHF EEKHNHELVA ACRIRMLRSQ KRLAVAQVVD GNFVDGSKIE PKSACELQYK  420
MIGDCEYIGY DPIDYKNKLP SRRMRELREG EAERMQQYFQ SKQLKNPSFF YAIQLDVDDQ  480
IANVFWADAK MVVDYSDFGD VVCFDTTCRL YRDCRPFATF IGMNHHKQMV IFGAALLYDE  540
TVESFKWLFR TFIEAMSGKK PKTILTDEDA TITEAIDLIL PGTPHRMCVW HVYQNALKQL  600
NHMFVDSGSF INDLSSCFFE HEEEEDFING WKAMLDVYGL WENDWLHEIF ECREKWAVVY  660
GRHNFCADLK SALLRENFTA TLKKYLKSDS DVLPFFKHLG KVVNEWHYKE LEANFDMSQH  720
MPRLMGDVIM LKQARDIYTP KIFELFQLEY ETCLNIVVNQ CTESESLFEY KVSIYGQPRE  780
YTVTFNSTDE TVACNCMKFE FMGVLCSHAL KVLDYRNIKL LPTKYILKRW TKDARV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-125	FAR1 family protein