PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894137.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GRAS
Protein Properties Length: 516aa    MW: 57350.1 Da    PI: 5.2344
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894137.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS443.21.8e-1351465161374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e+L +cA+a++++d   +++l+++l++++s +g+p+qRl ay++e+L arla+s+s++ykal+++e +   s+e l+++++++ev+P++kf++
  XP_023894137.1 146 LKEVLCACAKAIEENDRFTTEWLMSHLQQMVSVNGEPIQRLGAYMLEGLVARLASSGSSIYKALKCKEPA---SAELLSYMHILYEVCPYFKFGY 237
                     5789*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea++ +++vHiiDf i qG QW++L+q La+Rp+gpp++RiTg+++++s   +   l  +g+rL+k+Ae+++vpfefn+ +    ++
  XP_023894137.1 238 MSANGAIAEAMKDANEVHIIDFMIAQGSQWITLIQGLAARPGGPPKIRITGIDDSTSAyaRGGGLDIVGNRLSKLAESCKVPFEFNA-ARIPAAE 331
                     ******************************************************998899999************************.7889*** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L v+pgEa+aVn++l+lh+++desv  +++rd++L+lvkslsPk+v++veqe+++n+++F++rfle+l+yy+a+f+s++++lpr+++eri
  XP_023894137.1 332 VQLEDLGVRPGEAIAVNFALMLHHMPDESVGGQNHRDRLLRLVKSLSPKLVTLVEQESNTNTAPFFHRFLETLKYYTAIFESIDVTLPRDHKERI 426
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+r+ivn++acegaer+erhe l+kWr+r+++aGF+p+pls+ +++++k+ll+ ++++ y++ee++g+++lgW dr Lv+ +aW+
  XP_023894137.1 427 NVEQFCLARDIVNIIACEGAERVERHELLGKWRSRFMMAGFTPYPLSSLVNATIKTLLKSYSEK-YTLEERDGAFFLGWLDRVLVTSCAWQ 516
                     **************************************************************65.*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
MPTIQSLEPH SCSDDSSQGT HPSVPIFEQY CTLESHSGTS GYAIHNSPST VSFSPNGSPE  60
QDTESFPVHS HQSSDNTCGS PVNESCLTDD VDDLRHKIRE LETAMLGPHS DNPDICSITN  120
PVGIVQIPYD ADKCKQMMEM ISRWDLKEVL CACAKAIEEN DRFTTEWLMS HLQQMVSVNG  180
EPIQRLGAYM LEGLVARLAS SGSSIYKALK CKEPASAELL SYMHILYEVC PYFKFGYMSA  240
NGAIAEAMKD ANEVHIIDFM IAQGSQWITL IQGLAARPGG PPKIRITGID DSTSAYARGG  300
GLDIVGNRLS KLAESCKVPF EFNAARIPAA EVQLEDLGVR PGEAIAVNFA LMLHHMPDES  360
VGGQNHRDRL LRLVKSLSPK LVTLVEQESN TNTAPFFHRF LETLKYYTAI FESIDVTLPR  420
DHKERINVEQ FCLARDIVNI IACEGAERVE RHELLGKWRS RFMMAGFTPY PLSSLVNATI  480
KTLLKSYSEK YTLEERDGAF FLGWLDRVLV TSCAWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein