PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023893731.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 263aa MW: 27461.5 Da PI: 10.3894

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023893731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126	4.1e-39	34	131	2	102
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.....kaa 91 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s+ +s+s+s+ + XP_023893731.1 34 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-TVSVSVRGSASNSTsaslsS-- 125 78******************************************************************9777.33333333322222112221.. PP TCP 92 ksaakskksqk 102 ++ s++ XP_023893731.1 126 -----PSTSDH 131 .....222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MSNSDGANNG VTNGAIIDPQ RQQQQQPPGN GALAVKKPPS KDRHSKVDGR GRRIRMPIIC 60 AARVFQLTRE LGHKSDGQTI EWLLRQAEPS IIAATGTGTT PASFSTVSVS VRGSASNSTS 120 ASLSSPSTSD HKPTLLSPAP FILGKRVRTD EDGNGKDDTS SMSSIVGSTA GGAGGFWAVP 180 ARPDFWTFAA AAAAAAAVPP PEMVAAQQQP SLFMTHHHHH QHQQPMGEAS AARVGNYLPG 240 HLNLLASLSG GPGSSGRRED EPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	5e-59	TCP family protein