PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023893564.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Nin-like
Protein Properties Length: 333aa    MW: 38796.4 Da    PI: 9.0496
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023893564.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.21.2e-26200249352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     ++i l+dl+kyF+lpi +A+++L+v+lTvLKr+CR++GI+RWPhRkiksl
  XP_023893564.1 200 ARIALSDLAKYFDLPIVEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSL 249
                     689*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
METHSLKSLL VFQNRIYEEL IRSLHVYQVE DGKQNEIERE FLFSANGSYM EMTTNPALRL  60
LKFRVSEVYE GLVNSLWLCI LAFHADRPPH FTCIPSLLSI SRNPKLKSVP TIAVDLQIIF  120
QLDCIMEDKE QSRFPKGETC QQNDDCYRQS RRSSPTLHLD LNRLPYPVTE FESSEDQEKE  180
HCSPGIVHNK KKRAASEHVA RIALSDLAKY FDLPIVEASR NLKVGLTVLK RKCREFGIPR  240
WPHRKIKSLD SLIHDLQEET ERQQQKNKVA AMAVAKRQKM LESEKENIER KPFMELQCET  300
KKFRQDVFKR RHRARAIGNQ DPSTSSNEST NKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.14e-98Nin-like family protein