PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023893161.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 911aa MW: 100273 Da PI: 7.0506

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023893161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.3	3.3e-19	329	429	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ l+++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_023893161.1 329 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPLRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLRAGDTVTFSRID-PGGK 421 99************************555556677***********99899999999.*******************987.8998 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++r+ XP_023893161.1 422 LVMGFRRA 429 99999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 911 aa Download sequence
MTNSRLGPKD FGQDFDFGLM GSKICMNASC KATNTHEWKR GWPLRSGGFA DLCHKCGSFF 60 EDLLFCDKFH LEETGWRECS LCNKRIHCGC IMSKPLYEYL DFGGVECISC AKSSGLYSIW 120 RGEIPNGFGS FTLNNAGDSL SSPFEKKLVS EGVNEGKLMQ LCRIAEDNAP NLLPQSQTGE 180 ANASQVGTGF SNVTQPSVGS VTFAKSESSR QLLEGKDMHE SLTQPSLSMT LGTPNFMIPF 240 SGGPLDEQSK TPSPLQKGQR SRPILPKPLK SGLSASSETN KGVVQMRIAR PPAEGRGKNQ 300 LLPRYWPRIT DQELEKLSGD LNSTIVPLFE KVLSASDAGR IGRLVLPKAC AEAYFPPISQ 360 SEGLPLRIQD VKGNEWTFQF RFWPNNNSRM YVLEGVTPCI QSMQLRAGDT VTFSRIDPGG 420 KLVMGFRRAS NTVDTQDAHT SALPNGTPSG EASFSGVIEN LPSGNGYSGL FQTMKGSTEP 480 HLILSENLHS GDGDIRLHTS DNHGLGTNED SLQQPMPISE KKRTRNIGAK SKRLLMNSEE 540 ALELRLTWEE AQDLLRPPPS VKPSVVTIED HEFEEYDEPP VFGKRTIFTA RPSRGQEQWA 600 QCDDCSKWRR LPVEVLLPPK WTCSENEWDS SRCSCSVLEE ISQKELENLL RASKAPSISS 660 PDFKKRRIVG SHKSAQEREP SGLDALASAA VLGDNVGDSG EPSVGATTKH PRHRPGCSCI 720 VCIQPPSGKG KHNPTCTCNV CMTVKRRFKT LMLRKKKRQS EREAETAQKD HKHPRNKSEM 780 NGKPKDAQLP TNHLENEASQ SRIKAEVAGT SNGQIDLNSH PNREDMQLDL DVPGMSLLSL 840 VQAASIPLED YMEQRMTSFT CDQQGSLGSG IHPQVSGENK KRLSDEGSLA SGVWEHESRG 900 DGGSYHESNL D

Sequence ? help Back to Top

Protein Sequence Length: 911 aa Download sequence

MTNSRLGPKD FGQDFDFGLM GSKICMNASC KATNTHEWKR GWPLRSGGFA DLCHKCGSFF  60
EDLLFCDKFH LEETGWRECS LCNKRIHCGC IMSKPLYEYL DFGGVECISC AKSSGLYSIW  120
RGEIPNGFGS FTLNNAGDSL SSPFEKKLVS EGVNEGKLMQ LCRIAEDNAP NLLPQSQTGE  180
ANASQVGTGF SNVTQPSVGS VTFAKSESSR QLLEGKDMHE SLTQPSLSMT LGTPNFMIPF  240
SGGPLDEQSK TPSPLQKGQR SRPILPKPLK SGLSASSETN KGVVQMRIAR PPAEGRGKNQ  300
LLPRYWPRIT DQELEKLSGD LNSTIVPLFE KVLSASDAGR IGRLVLPKAC AEAYFPPISQ  360
SEGLPLRIQD VKGNEWTFQF RFWPNNNSRM YVLEGVTPCI QSMQLRAGDT VTFSRIDPGG  420
KLVMGFRRAS NTVDTQDAHT SALPNGTPSG EASFSGVIEN LPSGNGYSGL FQTMKGSTEP  480
HLILSENLHS GDGDIRLHTS DNHGLGTNED SLQQPMPISE KKRTRNIGAK SKRLLMNSEE  540
ALELRLTWEE AQDLLRPPPS VKPSVVTIED HEFEEYDEPP VFGKRTIFTA RPSRGQEQWA  600
QCDDCSKWRR LPVEVLLPPK WTCSENEWDS SRCSCSVLEE ISQKELENLL RASKAPSISS  660
PDFKKRRIVG SHKSAQEREP SGLDALASAA VLGDNVGDSG EPSVGATTKH PRHRPGCSCI  720
VCIQPPSGKG KHNPTCTCNV CMTVKRRFKT LMLRKKKRQS EREAETAQKD HKHPRNKSEM  780
NGKPKDAQLP TNHLENEASQ SRIKAEVAGT SNGQIDLNSH PNREDMQLDL DVPGMSLLSL  840
VQAASIPLED YMEQRMTSFT CDQQGSLGSG IHPQVSGENK KRLSDEGSLA SGVWEHESRG  900
DGGSYHESNL D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	745	756	KRRFKTLMLRKK
2	745	758	KRRFKTLMLRKKKR
3	755	785	KKKRQSEREAETAQKDHKHPRNKSEMNGKPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein