PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892752.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 304aa    MW: 35666.8 Da    PI: 7.8793
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.42.4e-2329117189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fY eY+++v Fs+rk++++k k+++ +t+ +fvC keg r ++k++ ++ +++rae r+gC+a+l++ +++ ++k++v+++  eHnH l
  XP_023892752.1  29 DFYIEYGRKVSFSIRKEYENKCKKTRVVTSTRFVCAKEGVRGKNKRD-QNIKNPRAEIRCGCEACLVIVLNRdSKKYVVNEFIAEHNHYL 117
                     6********************************************99.99*******************99989**************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MGIHVPSNVP MESTPFKRME FEIDEIAYDF YIEYGRKVSF SIRKEYENKC KKTRVVTSTR  60
FVCAKEGVRG KNKRDQNIKN PRAEIRCGCE ACLVIVLNRD SKKYVVNEFI AEHNHYLHLP  120
SIVHMMPSQR KVTATYAIEI DLAHESRLRL KQSYEFLSKQ VGGYDNLGFT KQDHKNYLRT  180
KRQRDMEYGE AASSGGYFSR QLKENPSYYF ATQLHCEELI TNIFWANAIM IIDYIHFGDV  240
ITFDTMYSTN RDVRPLGLFL DLNHHRETVV FGGALLYDET IEFFVWLFET FLEAMSEKKP  300
ILFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-61FAR1 family protein