PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892556.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HSF
Protein Properties Length: 302aa    MW: 33880.9 Da    PI: 9.3099
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892556.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind85.76.1e-273510732101
                     -HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTX...TTSEEEEESXXXXXXXXXXXXXXXXX CS
    HSF_DNA-bind  32 deeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksksk...ekiweFkhksFkkgkkellekikrkk 101
                     ++e+f+k++Lpk+FkhsnfaSFvRQLn+Y+F+kv++++++  s+     +weFkh+ Fk ++k+ l++i+rk+
  XP_023892556.1  35 QNEKFTKHILPKHFKHSNFASFVRQLNKYDFHKVRHSNEEGGSSpygAGAWEFKHPDFKMNNKDALDNIRRKA 107
                     6799**********************************99888556699**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGKRRGQLRR ARGASDSSGF YGIFWLRCAD DASAQNEKFT KHILPKHFKH SNFASFVRQL  60
NKYDFHKVRH SNEEGGSSPY GAGAWEFKHP DFKMNNKDAL DNIRRKAPAP RKPNALLDEM  120
IPTQQMDLVN TQLVATQQQL QQLQERYNEL SVHHSMLLQE LIGVQKTVVN HEHVMQYVMN  180
FLNSVDAQRR RESRVVNPFA GHHGQNGTEA SATDSAIPQE DDIPASPLQH ASKLLNEVNA  240
DHLLNTRNLE LMTESHARSN PALTTPPPDV ALRNGVRSTS RGDVPQSATS SGAASYAELD  300
KM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51910.15e-13HSF family protein