PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023892299.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NF-X1

Protein Properties

Length: 1112aa MW: 121191 Da PI: 8.0466

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023892299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	18.2	5.6e-06	365	382	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C + CH+G C++C XP_023892299.1 365 CGNHACYEVCHPGSCGEC 382 ****************** PP
2	zf-NF-X1	20.1	1.4e-06	518	536	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+Cq+lCH G CppC XP_023892299.1 518 CGRHSCQSLCHSGHCPPCL 536 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1112 aa Download sequence
MSSQAPNDRR DHRTRFPAQA ARHQWIPRGS TATTVVNQNQ NQNPNPSPIP IPNPNPPLRF 60 SYNYRNGGDF NSSSAPPESR AGGNNVSRGR GYVGYRPLNQ RKDRESQAGK GLKDLNLPQL 120 VQEIQEKLTK GTVECMICYD MVRRSAPIWS CSSCYSIFHL VCIKKWARAP TSVDLSAEKS 180 QGFNWRCPGC QSVQLTSLKE IRYICFCGKR PDPPSDLYLT PHSCGEPCGK PLERELGARE 240 SKEDICPHNC VLQCHPGPCP PCKAFAPPRL CPCGKKTITT RCSDRKSVLT CGQRCDKLLE 300 CERHRCERTC HVGSCDPCQV SVSASCFCKK KTEVVLCGDM SVKGEVKTEE GLFSCNSTCG 360 NKLTCGNHAC YEVCHPGSCG ECDLMPSRVN TCYCGKTSLQ EERQSCLDPI PTCSKKCDKL 420 LPCRMHNCTE SCHAGDCPPC LVRVSQKCRC GSTSRIVECY KTVMEEKFTC DKPCGRKKNC 480 GRHRCSERCC PLSNSNNFLT GDWDPHTCSI PCGKKLRCGR HSCQSLCHSG HCPPCLETIF 540 TDWSCACGRT SIPPPLPCGT PHPTCQLPCS VPQPCGHPSS HSCHFGDCPP CTVPIAKECI 600 GGHVVLRNIP CGSKDIRCNQ LCGKTRQCGL HACGRTCHAS PCDSSPGPEP GLKTSCGQTC 660 GAPRRDCRHT CKSPCHPSSL CPDERCDFPV TITCSCGRIT ATVPCDAGGN IGGFSADTLY 720 EASIIQKLPV PLQPVEASGK KIPLGQRKLM CDDECAKLER KRVLADAFDV NSNLDALHFG 780 ENPAVSEILT DLYRRDPKWV LSVEERCKFL VLGKSRGTTS SLKVHVFCPM LKDKRDAVRL 840 IADRWKLAIY SAGREPKRFI VVHVTPKSKP PPRVIGVKGS TNISTPHSPA FDPLVDMDPR 900 LVVSFLDLPR DSDISALVLR FGGECELVWL NDKNALAVFS DPARAATAMR RLDHGSVYQG 960 AVVVIPNGGA VAASSATSAW GGASTAKEGG LAAAMKGNPW KKVVVQEPGW KEDLWGDEEW 1020 PGDNADLHAS AWKKEAPIAA TLNRWSVLDS ETSLSSSAAP LRIEDPGKQA ASHSGPMLES 1080 DASGSNSAGQ HQDNFSGTEM SEVVDDWEKA FE

Sequence ? help Back to Top

Protein Sequence Length: 1112 aa Download sequence

MSSQAPNDRR DHRTRFPAQA ARHQWIPRGS TATTVVNQNQ NQNPNPSPIP IPNPNPPLRF  60
SYNYRNGGDF NSSSAPPESR AGGNNVSRGR GYVGYRPLNQ RKDRESQAGK GLKDLNLPQL  120
VQEIQEKLTK GTVECMICYD MVRRSAPIWS CSSCYSIFHL VCIKKWARAP TSVDLSAEKS  180
QGFNWRCPGC QSVQLTSLKE IRYICFCGKR PDPPSDLYLT PHSCGEPCGK PLERELGARE  240
SKEDICPHNC VLQCHPGPCP PCKAFAPPRL CPCGKKTITT RCSDRKSVLT CGQRCDKLLE  300
CERHRCERTC HVGSCDPCQV SVSASCFCKK KTEVVLCGDM SVKGEVKTEE GLFSCNSTCG  360
NKLTCGNHAC YEVCHPGSCG ECDLMPSRVN TCYCGKTSLQ EERQSCLDPI PTCSKKCDKL  420
LPCRMHNCTE SCHAGDCPPC LVRVSQKCRC GSTSRIVECY KTVMEEKFTC DKPCGRKKNC  480
GRHRCSERCC PLSNSNNFLT GDWDPHTCSI PCGKKLRCGR HSCQSLCHSG HCPPCLETIF  540
TDWSCACGRT SIPPPLPCGT PHPTCQLPCS VPQPCGHPSS HSCHFGDCPP CTVPIAKECI  600
GGHVVLRNIP CGSKDIRCNQ LCGKTRQCGL HACGRTCHAS PCDSSPGPEP GLKTSCGQTC  660
GAPRRDCRHT CKSPCHPSSL CPDERCDFPV TITCSCGRIT ATVPCDAGGN IGGFSADTLY  720
EASIIQKLPV PLQPVEASGK KIPLGQRKLM CDDECAKLER KRVLADAFDV NSNLDALHFG  780
ENPAVSEILT DLYRRDPKWV LSVEERCKFL VLGKSRGTTS SLKVHVFCPM LKDKRDAVRL  840
IADRWKLAIY SAGREPKRFI VVHVTPKSKP PPRVIGVKGS TNISTPHSPA FDPLVDMDPR  900
LVVSFLDLPR DSDISALVLR FGGECELVWL NDKNALAVFS DPARAATAMR RLDHGSVYQG  960
AVVVIPNGGA VAASSATSAW GGASTAKEGG LAAAMKGNPW KKVVVQEPGW KEDLWGDEEW  1020
PGDNADLHAS AWKKEAPIAA TLNRWSVLDS ETSLSSSAAP LRIEDPGKQA ASHSGPMLES  1080
DASGSNSAGQ HQDNFSGTEM SEVVDDWEKA FE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein