PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023890361.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 365aa MW: 39495.9 Da PI: 9.3484

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023890361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00052	160	181	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++Cgk +++ s L++H+ +H XP_023890361.1 160 KCEHCGKAYKHGSCLTKHLCMH 181 8******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MSRPTSQHRL SQGAAHPASL PRNSYSRTHA HTISLGSSAS NAHRIGRRKS STFNPAGANV 60 AALGAAVELG VADGSVALNR RRTSVSRTAL ASLNDDPSMP SSLPPHAPMS QETASSGVLL 120 DGPSLSSLHA LEKSKQLKAR RASDGTHLTK KEKAAAGELK CEHCGKAYKH GSCLTKHLCM 180 HSWEHTPQWQ VTSKLLISKH QQVQLLEAAS VLVAMNQDGP EMAEKHDSDS SSPAASRSSD 240 MQDEDSSSAE TTPPPPSDSY REVKRYSNTS SAYSRSYQSQ SVFSESAPTA DYQFGHHRHW 300 SHSRVANAVE MSDGEKQELI PHGADQTRAK YESCMIRGTA MSWFTSTFFP RPAVLNGPIF 360 RLAQV

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MSRPTSQHRL SQGAAHPASL PRNSYSRTHA HTISLGSSAS NAHRIGRRKS STFNPAGANV  60
AALGAAVELG VADGSVALNR RRTSVSRTAL ASLNDDPSMP SSLPPHAPMS QETASSGVLL  120
DGPSLSSLHA LEKSKQLKAR RASDGTHLTK KEKAAAGELK CEHCGKAYKH GSCLTKHLCM  180
HSWEHTPQWQ VTSKLLISKH QQVQLLEAAS VLVAMNQDGP EMAEKHDSDS SSPAASRSSD  240
MQDEDSSSAE TTPPPPSDSY REVKRYSNTS SAYSRSYQSQ SVFSESAPTA DYQFGHHRHW  300
SHSRVANAVE MSDGEKQELI PHGADQTRAK YESCMIRGTA MSWFTSTFFP RPAVLNGPIF  360
RLAQV