PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023889703.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 322aa MW: 35167.3 Da PI: 9.2975

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023889703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	124	146	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C + F+++ L H++ H XP_023889703.1 124 FSCNFCQRKFPTSQALGGHQNAH 146 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MKAPGNSHHE PCASEASSIS ATSEGPPSHK KELGVDESNK IMIMKMKEKF SKVFDHADPP 60 PHLGSGSSHV LLDLKLSSVD LNRGSLKKEL NLFDSMNSSS SLVPIEPISD EKSPEKSPDD 120 SRRFSCNFCQ RKFPTSQALG GHQNAHKRER ALAKRRQGMD NMGAFGHPHH FPYYPYSNLS 180 TSPLYGSFNR SSSSPLGVRM ESMIHKPSFA WSSSAGHGYR YGHGGSWSRQ TLINPQPSMD 240 RLRIEGSLAH NGAFGLAGGN SIPTTKFDEI STNALRNFGG SSTVATSNID INTKPTITGG 300 DYLRREDPPK NDALELDLSL KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	1e-25	C2H2 family protein