PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023889146.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 729aa MW: 80773.4 Da PI: 4.9041

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023889146.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	92.2	5.8e-29	134	241	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT.....X...TTSEEEEESXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks.....k...ekiweFkhksFkk 88 F++kl + l++ ++++li+ws++g+sf+vlde+efa++++p+ Fkh+n+aSFvRQLnmYgF+k+ + ++ s + + ++ ++h++F+k XP_023889146.1 134 FVQKLSSFLDS-NNTDLIRWSDDGRSFIVLDEDEFARTLIPELFKHNNYASFVRQLNMYGFHKTVNITDGSLRqsekaRkgvKPPSMYSHPYFRK 227 99**99987.66799******************************************99998876665555515669999***** PP XXXXXXXXXXXXXX CS HSF_DNA-bind 89 gkkellekikrkks 102 ++ +ll i++ ++ XP_023889146.1 228 NRPDLLWLIQKPTN 241 *****9998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
MSQQQLSTYP YATLQDQQTD FNGDFLQPYS QDQPFPDSAL MDENDFTAFS QNTAVTPAHN 60 GSVAPTSSTD LVRRSRNQLV GPQHLVQQEQ WNVQHGNMNG QPQQPGEEDE NELVMKVQAA 120 KRDAQGKRKQ IPPFVQKLSS FLDSNNTDLI RWSDDGRSFI VLDEDEFART LIPELFKHNN 180 YASFVRQLNM YGFHKTVNIT DGSLRQSEKA RKGVKPPSMY SHPYFRKNRP DLLWLIQKPT 240 NKSSAKRKRE GSAKEIYDSD DERQYSPGPE GRPHEIGASG VGQDLATLPR NELSAVRTEL 300 QKLQQQQRFI SKMITQLKEQ NDQFYRQATA FQALHDRHEN SINAILTFLA TFYNRSLDGT 360 GAANLVNMFN NHQQQAQHGS VVEEFNDAPN DGRAQLQRYV KKTPLLLGAP FSAAQSQSPL 420 LQPPGSAITQ PSSARQSTTP PGDTTHQEGR TMASNSRINV PSSASPVVKE ESKTPQPQQI 480 PESDQMMSLI NSVNATNAST PNTAAPAFDF NSALDHYQNA NGNAPLTPQQ RDNVLALMAN 540 QHGSTGSNNA LISPQPPVMP DLNQFRQTQQ QLEMLTNMQR QQDDRVQELN RRLQPLSPTG 600 SIPGLGQGVE ENPFDFIGNP GDYDPNSFFD FGNSAPDNAD IDFNFQPTTN ADASGNDDVN 660 NWDFGNNAGV DESNMFGEQF QDEGPASATE NVNTDGDGGR VESLSSSATS PAGTVPDDPG 720 TPRKRMKRS

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

MSQQQLSTYP YATLQDQQTD FNGDFLQPYS QDQPFPDSAL MDENDFTAFS QNTAVTPAHN  60
GSVAPTSSTD LVRRSRNQLV GPQHLVQQEQ WNVQHGNMNG QPQQPGEEDE NELVMKVQAA  120
KRDAQGKRKQ IPPFVQKLSS FLDSNNTDLI RWSDDGRSFI VLDEDEFART LIPELFKHNN  180
YASFVRQLNM YGFHKTVNIT DGSLRQSEKA RKGVKPPSMY SHPYFRKNRP DLLWLIQKPT  240
NKSSAKRKRE GSAKEIYDSD DERQYSPGPE GRPHEIGASG VGQDLATLPR NELSAVRTEL  300
QKLQQQQRFI SKMITQLKEQ NDQFYRQATA FQALHDRHEN SINAILTFLA TFYNRSLDGT  360
GAANLVNMFN NHQQQAQHGS VVEEFNDAPN DGRAQLQRYV KKTPLLLGAP FSAAQSQSPL  420
LQPPGSAITQ PSSARQSTTP PGDTTHQEGR TMASNSRINV PSSASPVVKE ESKTPQPQQI  480
PESDQMMSLI NSVNATNAST PNTAAPAFDF NSALDHYQNA NGNAPLTPQQ RDNVLALMAN  540
QHGSTGSNNA LISPQPPVMP DLNQFRQTQQ QLEMLTNMQR QQDDRVQELN RRLQPLSPTG  600
SIPGLGQGVE ENPFDFIGNP GDYDPNSFFD FGNSAPDNAD IDFNFQPTTN ADASGNDDVN  660
NWDFGNNAGV DESNMFGEQF QDEGPASATE NVNTDGDGGR VESLSSSATS PAGTVPDDPG  720
TPRKRMKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	2e-17	HSF family protein