PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023889028.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 266aa    MW: 29299 Da    PI: 4.9163
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023889028.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.54.9e-13214259655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L++l+P+     +k  s a++Le+AveY+k Lq
  XP_023889028.1 214 SIAERVRRTRISDRIRKLQDLVPNM----DKQTSTADMLEEAVEYVKLLQ 259
                     689*********************7....688***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MQPTPGGRSS SGGGGSGELS GGGGLARFRS APATWLEALL EEEKPVDQKE QKKGNEEKEE  60
EEEEDEDEED PLKPTQSLTQ LLASSADPSL LVFDSNIFRQ NSSPAEFFGN SDSEAYFSNF  120
GLNPNPPNYN NYDSHSNSNT FHGGGDGTGT KRFRELNHHF TAKFPSHHHL KGEQSSGGGG  180
GVGSFIDMEM EKLLEDSVPC RVRAKRGCAT HPRSIAERVR RTRISDRIRK LQDLVPNMDK  240
QTSTADMLEE AVEYVKLLQK QIQANE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1614GGRSSSGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.17e-43bHLH family protein