PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023888430.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 280aa    MW: 31351.6 Da    PI: 9.353
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023888430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.44.7e-19144177134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C+ C+tt+TplWR+gp+g+k+LCnaCG+++rk +
  XP_023888430.1 144 CADCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 177
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MTPAYLNPPS SPCPLVEQRE EDQHLKLFIS PHDHQASSSL LVPTFFERKQ HDEKGIKFEE  60
PQLQEHDDEK SVEEDISKHH KLSICQSQGG DPSKSTTGPV QWMSSKMRLM QKMMNPNFQD  120
TDKQRHGNGE INSPNCINNT IRVCADCNTT TTPLWRSGPR GPKSLCNACG IRQRKARRAM  180
AEAAAAANGI VVSTNNSTTK SYKVHNKEKK SRKSHGAQYK TKCKLMDTSH SKRKLAFKDL  240
ALSLRNNSTF GSVFPQDEAE GALLLMELSC GLVHSKKFCI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174213RKARRAMAEAAAAANGIVVSTNNSTTKSYKVHNKEKKSRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.15e-20GATA family protein