PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023888280.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family E2F/DP
Protein Properties Length: 344aa    MW: 38325.8 Da    PI: 5.7176
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023888280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.31.1e-2791173271
         E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  XP_023888280.1  91 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpsnsvtspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 173
                     689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MGTRSQQLSR EEEEEDPPGR GATTISGQSV STSRSVGSPS SRSEQTMATP ASDSTFLRLN  60
HLDIQGDDAG SQGAVAKKKK RGQRAVGGDK SGRGLRQFSM KVCEKVESKG RTTYNEVADE  120
LVAEFADPSN SVTSPDQQQY DEKNIRRRVY DALNVLMAMD IISKDKKEIQ WKGLPRTSLN  180
DIEELKTERL GLRNRIEKKA AYLQELDEQF VGLQNLIQRN EQLYSSENAP SGGVALPFIL  240
VQTRPHATVE VEISEDMQLV HFDFNSTPFE LHDDNYVLKA MKFCERPQVD DMAHNFTADG  300
GEGSSMSNMY QTQIPLPPMS NTTIRPPTSP PLPGILKARV KHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-157E2F/DP family protein