PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023887915.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 576aa MW: 64413.9 Da PI: 7.4464

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023887915.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.2	6.4e-18	32	121	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv+ s+ l lp kfa+++ ++ +++ led+sgr+W+v++ + +g+ +++GW++F ++gL+ gDf+vF ++g s f vv XP_023887915.1 32 FFKVM--IGDQFSKVLFLPPKFAATIsALV---NQKTFLEDSSGRQWKVTI--SIVDGSLAFQRGWSSFSLDHGLEIGDFLVFNYMG-SHF--VV 116 67777..444555669********6555...34699*********..8889999***********************98.788..89 PP EEE-S CS B3 95 kvfrk 99 +++k XP_023887915.1 117 NIYNK 121 88876 PP
2	B3	37.5	4.4e-12	513	576	32	99
--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 32 esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 k + l+d++ + W v + +++ +l++GW++F +an++++gD +vF+l+ se+ +vv+++rk XP_023887915.1 513 DRKVVYLRDSDMKLWPVLY--HERPNLKLLASGWESFSEANKIQTGDECVFSLE--SEGIYVVQIIRK 576 456899***********..999999***********************85..577789999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MGGKVEACVE CTRKCLLIHK KKKNSSPVVT SFFKVMIGDQ FSKVLFLPPK FAATISALVN 60 QKTFLEDSSG RQWKVTISIV DGSLAFQRGW SSFSLDHGLE IGDFLVFNYM GSHFVVNIYN 120 KTGCEKLLFP ENSSPKKRAR TNCNSTAKPS QWHTNDEDSM NKQGSSTSAV SMSGAEISQS 180 QCTMEVPENP SNHEHIIQRP KPTSTAEYCE ETYYMIDRDV GDRQDDRSSM LDLSKFEMKN 240 INSVADVTKK SAAKDVRSST SQMFLTETCL FDKDPVTSGT VSKVGNIDAS EIERSHFFEK 300 LEKKPSLPDK SFCNDNTSGH LFTTSAVMLD KNKERISDIL NTKCQIAGES GDKVSKSLTL 360 KNQVFMSSKE HALLNDIDSC RSAAQKFIAM SESFGVPNNF DRRNCQTGEL IKNLKKEAVE 420 ITTDLRSHKE RGGQEIYGKE SKVIKEELIQ HADTIVRDND IGLRMVKAEP VDSIGISSLN 480 TASTSSLVAT ENNSFLELST CLPYSSKGRV RMDRKVVYLR DSDMKLWPVL YHERPNLKLL 540 ASGWESFSEA NKIQTGDECV FSLESEGIYV VQIIRK

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MGGKVEACVE CTRKCLLIHK KKKNSSPVVT SFFKVMIGDQ FSKVLFLPPK FAATISALVN  60
QKTFLEDSSG RQWKVTISIV DGSLAFQRGW SSFSLDHGLE IGDFLVFNYM GSHFVVNIYN  120
KTGCEKLLFP ENSSPKKRAR TNCNSTAKPS QWHTNDEDSM NKQGSSTSAV SMSGAEISQS  180
QCTMEVPENP SNHEHIIQRP KPTSTAEYCE ETYYMIDRDV GDRQDDRSSM LDLSKFEMKN  240
INSVADVTKK SAAKDVRSST SQMFLTETCL FDKDPVTSGT VSKVGNIDAS EIERSHFFEK  300
LEKKPSLPDK SFCNDNTSGH LFTTSAVMLD KNKERISDIL NTKCQIAGES GDKVSKSLTL  360
KNQVFMSSKE HALLNDIDSC RSAAQKFIAM SESFGVPNNF DRRNCQTGEL IKNLKKEAVE  420
ITTDLRSHKE RGGQEIYGKE SKVIKEELIQ HADTIVRDND IGLRMVKAEP VDSIGISSLN  480
TASTSSLVAT ENNSFLELST CLPYSSKGRV RMDRKVVYLR DSDMKLWPVL YHERPNLKLL  540
ASGWESFSEA NKIQTGDECV FSLESEGIYV VQIIRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	141	PKKRART

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	6e-15	B3 family protein