PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023886859.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 516aa MW: 56292.2 Da PI: 5.0279

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023886859.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48	2.8e-15	31	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l ++vk++G g+W+++ + g+ R++k+c++rw ++l XP_023886859.1 31 KGPWTAAEDSILMEYVKKFGEGNWNAVQKNCGLMRCGKSCRLRWANHL 78 79******************************************9986 PP
2	Myb_DNA-binding	45.7	1.5e-14	84	127	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++ eE+ ++++++++lG++ W++ a+ ++ gRt++++k++w++ XP_023886859.1 84 KGSFSGEEERIIIELHAKLGNK-WARMAAQLP-GRTDNEIKNYWNT 127 68999***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MISKSGEGAQ NQEAMAAAKG GAESSRAGLK KGPWTAAEDS ILMEYVKKFG EGNWNAVQKN 60 CGLMRCGKSC RLRWANHLRP NLKKGSFSGE EERIIIELHA KLGNKWARMA AQLPGRTDNE 120 IKNYWNTRMK RRQRAGLPLY PQEVQQEAAV FHLLQQQHHQ KQPHSSSVPF SAFLSSSQPR 180 KLNYNPSLSV FNTMNFSSPT NPIQNQVTPG IYSNPSNQFK FFSENNNNPA YALPLSPVSP 240 FGSSPSPIFN QNIAPQPLSA PFVEYNSDSF GSSQYNRSPV VMGPAPYEPF GLVQGLETEL 300 PSNQTPLNSA THTSSNSSGD ENPLGASSSA NDYEIENPLS QSPDNSGLLD ALLVESQTLC 360 EKSKGKEVSS TVASDKGKGV MVEASTEEED PMNVDSVFKT GGETSAENHW DDLSSSQSQS 420 QSSIGMKPAE DPLEEMNSMD DDLASLLTNF PSAMPTPEWY RGGRHLSNGQ SSGVESDNVR 480 LDTQQSASPA PVTNTTEPEL EWGLSPCYWK NLPGIC

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MISKSGEGAQ NQEAMAAAKG GAESSRAGLK KGPWTAAEDS ILMEYVKKFG EGNWNAVQKN  60
CGLMRCGKSC RLRWANHLRP NLKKGSFSGE EERIIIELHA KLGNKWARMA AQLPGRTDNE  120
IKNYWNTRMK RRQRAGLPLY PQEVQQEAAV FHLLQQQHHQ KQPHSSSVPF SAFLSSSQPR  180
KLNYNPSLSV FNTMNFSSPT NPIQNQVTPG IYSNPSNQFK FFSENNNNPA YALPLSPVSP  240
FGSSPSPIFN QNIAPQPLSA PFVEYNSDSF GSSQYNRSPV VMGPAPYEPF GLVQGLETEL  300
PSNQTPLNSA THTSSNSSGD ENPLGASSSA NDYEIENPLS QSPDNSGLLD ALLVESQTLC  360
EKSKGKEVSS TVASDKGKGV MVEASTEEED PMNVDSVFKT GGETSAENHW DDLSSSQSQS  420
QSSIGMKPAE DPLEEMNSMD DDLASLLTNF PSAMPTPEWY RGGRHLSNGQ SSGVESDNVR  480
LDTQQSASPA PVTNTTEPEL EWGLSPCYWK NLPGIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	1e-72	MYB family protein