PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023886583.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 408aa MW: 43248.7 Da PI: 8.1795

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023886583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.3	3.7e-40	72	193	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ XP_023886583.1 72 PPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSAPshfmrnn 166 789******************************************************************99987777777777555555666666 PP TCP 89 ..........................k 89 XP_023886583.1 167 tsylfnssnfsmphhrnisssflfpsT 193 666664444444444433333333220 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MIMDDHENGL RRPNFPLQLL EKKEEDLSSA CSSSHYPNTI TTILTTTAST TSTSLQVQQA 60 SEQSKLSNNK PPPKRTSTKD RHTKVDGRGR RIRMPAACAA RVFQLTRELG HKSDGETIEW 120 LLQQAEPAVI AATGTGTIPA NFTSLNISLR SSGSTMSAPS HFMRNNTSYL FNSSNFSMPH 180 HRNISSSFLF PSTTSSDQTN SGSGNSNSNS SMFLNSNVNV NNVTLHSQAK QETLLDVSDC 240 EGRVTKRRPV LDHQQEMSQN QMGGYLLQSS NSGSINPGTF WMLTNPNPST TQVMSGGHDP 300 MWTFPSSGGG GGGGTNSGAG MYRGSIPMSS GLHFMNFAPP VALLPSQQFG TGIGGGGGGG 360 GASGDTHLGM LAALNAYRPI VGSGAMESPA SGTHHHGGED GRETSHNS

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MIMDDHENGL RRPNFPLQLL EKKEEDLSSA CSSSHYPNTI TTILTTTAST TSTSLQVQQA  60
SEQSKLSNNK PPPKRTSTKD RHTKVDGRGR RIRMPAACAA RVFQLTRELG HKSDGETIEW  120
LLQQAEPAVI AATGTGTIPA NFTSLNISLR SSGSTMSAPS HFMRNNTSYL FNSSNFSMPH  180
HRNISSSFLF PSTTSSDQTN SGSGNSNSNS SMFLNSNVNV NNVTLHSQAK QETLLDVSDC  240
EGRVTKRRPV LDHQQEMSQN QMGGYLLQSS NSGSINPGTF WMLTNPNPST TQVMSGGHDP  300
MWTFPSSGGG GGGGTNSGAG MYRGSIPMSS GLHFMNFAPP VALLPSQQFG TGIGGGGGGG  360
GASGDTHLGM LAALNAYRPI VGSGAMESPA SGTHHHGGED GRETSHNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	8e-55	TCP family protein