PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023886570.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Dof

Protein Properties

Length: 541aa MW: 60214.9 Da PI: 4.7256

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023886570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.8	1.4e-39	189	249	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s+ XP_023886570.1 189 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNST 249 7899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MPTETPTPNT PFFLSLRKNQ IFYARFLAFF VFLGLPFPLF GYQEKMQENK DPTIKLFGKK 60 IPLTAETDEV LLVSDLEKEK CDRVEVVVDE EEEEEEEEEE DDDDDDEEQE EDDKAEKDPP 120 TAEGTETREQ DNDSPSNAEE PADLEILPDG NVNPKTPSIE EEHGKSKIAK MEKDQTETAN 180 SQEKTLKKPD KILPCPRCNS MDTKFCYYNN YNVNQPRHFC KACQRYWTAG GTMRNVPVGA 240 GRRKNKNSTS QYRHITISEA LQAARVDAPN GTHQPSYKSN GRVLSFGIDA PICDSMASVL 300 NLADNKVLNG TQNGLHSFEE QRIPVPGKRG ENGDDSTSGS TITVSNSMEE GGKHFPRDPF 360 VQSINGFPHQ IPCLPGVPWP YPWNSAVPPP AFCPPGFPMS FYPAAYWNCG VPGTWGIPWL 420 SPQSSPNQKS PSSNQNSPTL GKHSREGDML KPDNLEKEES PKQKNGCVLV PKTLRIDDPS 480 EAAKSSIWTT LGIKNESISK GGMFKAFQSK GEEKNHISEH SPAMLANPAA LSRSLNFHES 540 S

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MPTETPTPNT PFFLSLRKNQ IFYARFLAFF VFLGLPFPLF GYQEKMQENK DPTIKLFGKK  60
IPLTAETDEV LLVSDLEKEK CDRVEVVVDE EEEEEEEEEE DDDDDDEEQE EDDKAEKDPP  120
TAEGTETREQ DNDSPSNAEE PADLEILPDG NVNPKTPSIE EEHGKSKIAK MEKDQTETAN  180
SQEKTLKKPD KILPCPRCNS MDTKFCYYNN YNVNQPRHFC KACQRYWTAG GTMRNVPVGA  240
GRRKNKNSTS QYRHITISEA LQAARVDAPN GTHQPSYKSN GRVLSFGIDA PICDSMASVL  300
NLADNKVLNG TQNGLHSFEE QRIPVPGKRG ENGDDSTSGS TITVSNSMEE GGKHFPRDPF  360
VQSINGFPHQ IPCLPGVPWP YPWNSAVPPP AFCPPGFPMS FYPAAYWNCG VPGTWGIPWL  420
SPQSSPNQKS PSSNQNSPTL GKHSREGDML KPDNLEKEES PKQKNGCVLV PKTLRIDDPS  480
EAAKSSIWTT LGIKNESISK GGMFKAFQSK GEEKNHISEH SPAMLANPAA LSRSLNFHES  540
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-114	Dof family protein