PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023886088.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 193aa MW: 22641.6 Da PI: 8.9202 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.9 | 7.6e-05 | 42 | 70 | 1 | 23 |
EEET.....TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp.....dCgksFsrksnLkrHirt.H 23 ++C Cgk F++ L +H+ H XP_023886088.1 42 FRCDwdqqySCGKKFTTAGGLSVHMTQvH 70 6788888889***************8766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MSKKRKDIPD LQEALDKRWC YYCERIFQDD KVLCDHQRYK HFRCDWDQQY SCGKKFTTAG 60 GLSVHMTQVH KTKLEKIQNT IEGRENPAVE IFGMLGIPQE LLDAHRREIE TQYYQAEAEH 120 RARTGNPLRG PNPNAGKKQV EELTHEEKMA KLEAHRAKNR ANKAAREAGF KDAEDQARQL 180 VSVIYTIVHE RRY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30970.1 | 5e-28 | C2H2 family protein |