PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885767.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 201aa MW: 23346.5 Da PI: 9.2229

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885767.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	65	1.4e-20	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+++++ +G+++Wk++a++ g++R++k+c++rw +yl XP_023885767.1 17 RGAWTAEEDQKLAQVIEIHGPKRWKSVAAKAGLNRCGKSCRLRWMNYL 64 89********************************************97 PP
2	Myb_DNA-binding	50.8	3.9e-16	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_023885767.1 70 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 115 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MPMAPLSSRC TKKEANRGAW TAEEDQKLAQ VIEIHGPKRW KSVAAKAGLN RCGKSCRLRW 60 MNYLRPNIKR GNISDQEEDL ILRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNSHLSKKIK 120 LKEKQNRGFM VQSEHEKTNV MEMDHTVDRR EEGTSTRNVD SQSSFTGDDL FNSSSEGPLT 180 LEWMSKFLEM DESWFELLHD I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	2e-55	MYB family protein