PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023885527.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 319aa    MW: 35623.7 Da    PI: 4.3339
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023885527.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.31.2e-131311435128
             NAM  35 kevdiykv.ePwdLpkkvka..eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk......kgelvglkktLvfy.kgrapkgek 118
                        d++++  Pw++ + ++a  ++++ yfF++ +k ++  +r  r + + g+W+++ + k+++ +      ++  +g kk L f  kg+ ++ + 
  XP_023885527.1  13 GFSDLVYIkPPWKFCTDLTAfpGDEKHYFFTELKKMKH--NRVVRtVDSYGTWHESSS-KKIFGRnnyinnNNGIIGFKKLLNFKvKGEGKEMKT 104
                     55565555268999753333447888899999888764..5888845568****9877.5565554666656677*********9889999999* PP

             NAM 119 tdWvmheyrl 128
                     tdW+mhe++l
  XP_023885527.1 105 TDWLMHEFSL 114
                     ********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVRGERLAWN AIGFSDLVYI KPPWKFCTDL TAFPGDEKHY FFTELKKMKH NRVVRTVDSY  60
GTWHESSSKK IFGRNNYINN NNGIIGFKKL LNFKVKGEGK EMKTTDWLMH EFSLPEKETN  120
LVLCVIQKKK KKKEEMGSAY DTYHEFDPMS FLDPDSPTSA GGDPSPAPAL DSEEEETQPS  180
KKMRSDPKID DDPFPGGDPC SAPAPAPAPA PAHDNHLELQ VLDSEEEEKT RPSSDPKLDD  240
HPVSVASSSV DLAPDFFEEL TADLLEVSDL PDDESGLLDV LLDDPFGLRD DVLGLSNAVF  300
GSPDDDFFDF QAPLFLSNS