PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885446.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 568aa MW: 60390.7 Da PI: 7.1815

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.7	1.2e-39	164	276	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+s+ s++ XP_023885446.1 164 TAKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSTLSAPpsksaphs 258 689*****************************************************************999888888888885555544444444 PP TCP 89 .................k 89 + XP_023885446.1 259 fhgalalahhpyheegfA 276 444444444444444431 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MELTDLQTNK QNNNNPHHHH HHHHNLNQNQ HQHHLHQNQS SSHLPISFDG RSGGPPFMGS 60 ISIQAGLTST THGGASSSSS SLSTSSSSPS SSSSSTSTSI DASLAIATRS DSHPSTRSVP 120 LLDSIKKNPS PSQQPQQQQL TIATIATTAT ATTTTAVTTT ITPTAKRSTK DRHTKVDGRG 180 RRIRMPATCA ARVFQLTREL GHKSDGETIE WLLQQAEPAI IAATGTGTIP ANFSTLNVSL 240 RSSGSTLSAP PSKSAPHSFH GALALAHHPY HEEGFAHPAF LGFHQHQQQQ HQQHLMTADQ 300 IAEALPSGGG GGGDSGGGGD STENYMRKRF REDLFKEDTQ PNESGASGSG GGDDESPNKY 360 SKSGLQISKQ QQQQQQQDSV TAGSSGLLRP SNILPATAMW AVAPAPTSGT GSTFWMLPVT 420 GGGPSVATAT SGAGPSESSH MWPFPAATSG NTLQAPLHFM PRLNFPGSLE FQQGNNSNRG 480 SPLQLGSMLM PHQQQQQQPS QHLGLGVSES NLGMLAALNA YSRGGLNMNS DHQQNHPLEH 540 HHHHHHQQQQ HQQPQATDSG DEDPENSQ

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MELTDLQTNK QNNNNPHHHH HHHHNLNQNQ HQHHLHQNQS SSHLPISFDG RSGGPPFMGS  60
ISIQAGLTST THGGASSSSS SLSTSSSSPS SSSSSTSTSI DASLAIATRS DSHPSTRSVP  120
LLDSIKKNPS PSQQPQQQQL TIATIATTAT ATTTTAVTTT ITPTAKRSTK DRHTKVDGRG  180
RRIRMPATCA ARVFQLTREL GHKSDGETIE WLLQQAEPAI IAATGTGTIP ANFSTLNVSL  240
RSSGSTLSAP PSKSAPHSFH GALALAHHPY HEEGFAHPAF LGFHQHQQQQ HQQHLMTADQ  300
IAEALPSGGG GGGDSGGGGD STENYMRKRF REDLFKEDTQ PNESGASGSG GGDDESPNKY  360
SKSGLQISKQ QQQQQQQDSV TAGSSGLLRP SNILPATAMW AVAPAPTSGT GSTFWMLPVT  420
GGGPSVATAT SGAGPSESSH MWPFPAATSG NTLQAPLHFM PRLNFPGSLE FQQGNNSNRG  480
SPLQLGSMLM PHQQQQQQPS QHLGLGVSES NLGMLAALNA YSRGGLNMNS DHQQNHPLEH  540
HHHHHHQQQQ HQQPQATDSG DEDPENSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-73	TCP family protein